| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1291 |
|---|
| Symbol | |
|---|
| ID | 3366786 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 1456278 |
|---|
| End bp | 1457687 |
|---|
| Gene Length | 1410 bp |
|---|
| Protein Length | 469 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637651630 |
|---|
| Product | threonine synthase |
|---|
| Protein accession | YP_234380 |
|---|
| Protein GI | 66044539 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0498] Threonine synthase |
|---|
| TIGRFAM ID | [TIGR00260] threonine synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0226346 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.85232 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCTATA TCAGTACTCG CGGGCAAGCG CCTGCATTGA ATTTCGAAGA CGTGCTGTTG
ACTGGTCTGG CCAGCGATGG TGGCCTCTAT GTGCCGGAAA ACCTGCCGCG CTTCACGCAG
GAAGAGATCG CTTCCTGGGC AGGTCTGCCT TATCACGAAC TCGCCTTCCG GGTGATGCGC
CCCTTCGTGG CGGGCAGCAT TCCGGATGCC GACTTCAAAA AGATTCTCGA AGAGACCTAC
GGCGTGTTTG CCCACAGTGC TGTTGCGCCG CTGCGCCAGC TGCATGGCAA CGAGTGGGTA
CTCGAACTGT TCCATGGCCC GACGCTGGCG TTCAAGGACT TCGCACTGCA ACTGCTCGGC
CGCCTGCTTG ACTATATTCT GGCCAAGCGT GGCCAGCGTG TCGTGATCAT CGGTGCAACC
TCGGGCGACA CCGGTTCTGC GGCCATCGAA GGCTGCCGTC GCTGCGACAA CGTCGACATC
TTCATCCTGC ACCCGAACAA CCGGGTGTCC GATGTACAAC GTCGGCAGAT GACCACTATC
TTCGGTGACA ACATCCATAA CATCGCAGTC GAAGGCAACT TCGACGACTG CCAGGAAATG
GTCAAGGCCA GCTTCGCTGA CCAGAGCTTC TTGAAGGGCA CACCGTTGGT CGCGGTCAAC
TCGATCAACT GGGCGCGGAT CATGGCTCAG ATCGTCTACT ACTTCCACGC GTCGCTGCAG
TTGGGCGGAC CTGCGCGTTC GGTATCGTTC TCGGTACCGA CCGGTAATTT CGGCGATATC
TTTGCCGGTT ATCTGGCGCG CAATATGGGC CTGCCGATCA ATCAGTTGAT CGTTGCCACC
AACCGCAACG ACATCCTGCA CCGCTTCATG AGCGGCAATC AGTACGTCAA GGAAACCCTG
CACGCCACGC TGTCGCCTTC CATGGACATC ATGGTGTCGT CCAACTTCGA GCGCCTGCTG
TTCGACATGC ACGGTCGCAA CGGCGCTGCC ATTGCCGAGT TGATGAGCAC GTTCCGCCAG
GGTGGCGGTT TCAGCGTCGA GGAAGAGCGC TGGACCGAGA CCCGCAAACT GTTCGATTCG
CTGGCAGTCA GTGACGAGGA CACCTGCACG ACCATCGCCG AAGTGTTCGC CAGCACTGGC
GAGTTGCTCG ACCCGCATAC CGCTATCGGG GTGAAGGCTG CGCGTGAATG CCGACGCAGT
CTGGACACGC CGATGGTGAT TCTGGGCACC GCGCATCCGG TCAAGTTTCC GGAAGCGGTT
GAGAAAGCCG GTGTAGGAAA AGCGCTTGAA CTACCTGCAC ATTTGTCTGA TTTGTTCGAG
CGCGACGAGC GCTGTACGGT TCTGCCAAAT GACCTGAAAG CCATACAGGC GTTTGTCAGC
CAGCACGGCA ATCGCGGCAA ACCGCTCTGA
|
|---|
| Protein sequence | MRYISTRGQA PALNFEDVLL TGLASDGGLY VPENLPRFTQ EEIASWAGLP YHELAFRVMR
PFVAGSIPDA DFKKILEETY GVFAHSAVAP LRQLHGNEWV LELFHGPTLA FKDFALQLLG
RLLDYILAKR GQRVVIIGAT SGDTGSAAIE GCRRCDNVDI FILHPNNRVS DVQRRQMTTI
FGDNIHNIAV EGNFDDCQEM VKASFADQSF LKGTPLVAVN SINWARIMAQ IVYYFHASLQ
LGGPARSVSF SVPTGNFGDI FAGYLARNMG LPINQLIVAT NRNDILHRFM SGNQYVKETL
HATLSPSMDI MVSSNFERLL FDMHGRNGAA IAELMSTFRQ GGGFSVEEER WTETRKLFDS
LAVSDEDTCT TIAEVFASTG ELLDPHTAIG VKAARECRRS LDTPMVILGT AHPVKFPEAV
EKAGVGKALE LPAHLSDLFE RDERCTVLPN DLKAIQAFVS QHGNRGKPL
|
|---|
| |