Gene Psyr_1238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1238 
Symbol 
ID3366733 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1396068 
End bp1396454 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content57% 
IMG OID637651577 
Productscaffold protein 
Protein accessionYP_234327 
Protein GI66044486 
COG category[C] Energy production and conversion 
COG ID[COG0822] NifU homolog involved in Fe-S cluster formation 
TIGRFAM ID[TIGR01999] FeS cluster assembly scaffold IscU 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTACA GCGAAAAGGT CATCGACCAC TACGAAAATC CACGTAACGT CGGCAAGATG 
AACGCGGAAG ATCCTGACGT CGGCACCGGC ATGGTCGGCG CTCCTGCGTG CGGCGACGTG
ATGCGTCTGC AGATCAAGGT CAACGAGCAG GGCGTTATCG AAGACGCCAA GTTCAAGACC
TACGGCTGCG GTTCGGCCAT CGCGTCCAGC TCCCTGGCGA CCGAGTGGAT GAAAGGCAAG
ACTCTGGATG AAGCAGAGAC CATCAAGAAC ACTCAGCTGG CTGAAGAGCT GGCACTGCCG
CCAGTGAAGA TTCACTGCTC GGTACTCGCT GAAGACGCCA TCAAGGCCGC CGTTCGCGAC
TACAAGCAGA AGAAAGGTCT GCTGTAA
 
Protein sequence
MAYSEKVIDH YENPRNVGKM NAEDPDVGTG MVGAPACGDV MRLQIKVNEQ GVIEDAKFKT 
YGCGSAIASS SLATEWMKGK TLDEAETIKN TQLAEELALP PVKIHCSVLA EDAIKAAVRD
YKQKKGLL