Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1238 |
Symbol | |
ID | 3366733 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 1396068 |
End bp | 1396454 |
Gene Length | 387 bp |
Protein Length | 128 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637651577 |
Product | scaffold protein |
Protein accession | YP_234327 |
Protein GI | 66044486 |
COG category | [C] Energy production and conversion |
COG ID | [COG0822] NifU homolog involved in Fe-S cluster formation |
TIGRFAM ID | [TIGR01999] FeS cluster assembly scaffold IscU |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTTACA GCGAAAAGGT CATCGACCAC TACGAAAATC CACGTAACGT CGGCAAGATG AACGCGGAAG ATCCTGACGT CGGCACCGGC ATGGTCGGCG CTCCTGCGTG CGGCGACGTG ATGCGTCTGC AGATCAAGGT CAACGAGCAG GGCGTTATCG AAGACGCCAA GTTCAAGACC TACGGCTGCG GTTCGGCCAT CGCGTCCAGC TCCCTGGCGA CCGAGTGGAT GAAAGGCAAG ACTCTGGATG AAGCAGAGAC CATCAAGAAC ACTCAGCTGG CTGAAGAGCT GGCACTGCCG CCAGTGAAGA TTCACTGCTC GGTACTCGCT GAAGACGCCA TCAAGGCCGC CGTTCGCGAC TACAAGCAGA AGAAAGGTCT GCTGTAA
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Protein sequence | MAYSEKVIDH YENPRNVGKM NAEDPDVGTG MVGAPACGDV MRLQIKVNEQ GVIEDAKFKT YGCGSAIASS SLATEWMKGK TLDEAETIKN TQLAEELALP PVKIHCSVLA EDAIKAAVRD YKQKKGLL
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