| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1228 |
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| Symbol | tgt |
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| ID | 3366723 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 1386415 |
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| End bp | 1387548 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637651567 |
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| Product | queuine tRNA-ribosyltransferase |
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| Protein accession | YP_234317 |
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| Protein GI | 66044476 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
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| TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.293358 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTCGCA CCTGTCGTAT GTCTTTCGAG TTGTTGGCCA CCGATGGCAA GGCCCGTCGC
GGTCGGCTGA CCTTCCCGCG TGGTGTGGTG GAAACCCCGG CGTTCATGCC GGTGGGCACC
TATGGCACGG TCAAGGGCAT GCTGCCCCGT GATATCGAGG CGACCGGCGC GCAGATGATT
CTGGGCAATA CGTTTCACCT GTGGCTGCGT CCGGGTACCG AAGTCATCAA GGGCCACGGC
GACCTGCACG ATTTCATGCA GTGGAAGGGG CCGATTCTGA CCGACTCCGG CGGTTTTCAG
GTGTTCAGCC TGGGCGCCAT GCGCAAGATC AAGGAAGAGG GCGTGACGTT TGCCTCGCCG
GTCGATGGTG CCAAGGTGTT CATGGGGCCG GAAGAGTCGA TGCAGGTCCA GCGTGATCTG
GGTTCGGACG TGGTGATGAT CTTCGACGAA TGCACACCGT ACCCGGCCGA CGAAGATGTG
GCGCGTGTCT CCATGGAGCT GTCGCTGCGC TGGGCCAAGC GTTCCAAAAT CGCCCACGGC
GAAAACACTG CCGCGCTGTT CGGCATCGTT CAGGGGGGCA TGCACGAGAA CCTGCGCAAG
CGCTCGCTGG AAGGCCTGGA CGAAATCGGT TTCGACGGTC TGGCGATTGG CGGTCTGTCG
GTAGGCGAAC CCAAGCACGA GATGATCAAG GTGCTCGATT ACCTGCCGGG CCTCATGCCG
GCAGACAAAC CTCGTTACCT GATGGGTGTA GGCAAGCCGG AAGATCTGGT CGAAGGTGTG
CGCCGTGGCG TCGACATGTT CGACTGCGTG ATGCCGACCC GCAACGCTCG CAACGGCCAT
CTGTTCACCG ATACCGGTGT ATTGAAAATC CGTAACGCGT TCCATCGTCA CGACAATTCG
CCGCTGGATC CGACCTGCGA TTGCTACACC TGCCAGAACT TCTCGCGCGC TTATCTGCAT
CACCTGGACA AGTGCGGGGA AATGCTGGGG AGCATGCTCA ATACAATCCA CAATTTGCGG
CACTACCAGC TGCTTATGGC TGGTTTGCGC GAGGCTATTC AACAGGGTAC ATTGGCCGCC
TTCGTCGATG CCTTCTATGC CAAACGCGGC CTTCCAACGC CGCCTCTGGG TTGA
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| Protein sequence | MSRTCRMSFE LLATDGKARR GRLTFPRGVV ETPAFMPVGT YGTVKGMLPR DIEATGAQMI
LGNTFHLWLR PGTEVIKGHG DLHDFMQWKG PILTDSGGFQ VFSLGAMRKI KEEGVTFASP
VDGAKVFMGP EESMQVQRDL GSDVVMIFDE CTPYPADEDV ARVSMELSLR WAKRSKIAHG
ENTAALFGIV QGGMHENLRK RSLEGLDEIG FDGLAIGGLS VGEPKHEMIK VLDYLPGLMP
ADKPRYLMGV GKPEDLVEGV RRGVDMFDCV MPTRNARNGH LFTDTGVLKI RNAFHRHDNS
PLDPTCDCYT CQNFSRAYLH HLDKCGEMLG SMLNTIHNLR HYQLLMAGLR EAIQQGTLAA
FVDAFYAKRG LPTPPLG
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