Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1217 |
Symbol | |
ID | 3366711 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 1374846 |
End bp | 1375400 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637651558 |
Product | sigma-70 region 2:sigma-70 region 4 |
Protein accession | YP_234309 |
Protein GI | 66044468 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.581841 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.969738 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCCCGA ATCTTGTGAT CCTTGATGCA ACCGAACCAC GCCAACCATC GTCGTCCGCC GGTATCCGGC AATTGACGGC CGATCAGGTC CAGATGCTCA GAGCGTTCAT CCAGAAGCGG GTGAAGAACG CTGATGATGT GGATGACATC CTGCAATGCG TGTTTCTCGA GGCGTTACGC AATGAGCACA AGTTTCAGCA CGCCAGCAAA CCGCAAACCT GGTTATGTGG CATTGCGCTG AATCTGATCC GCAATCACTT CCGCAAAATG TATCGCCAGC CCTATCAGGA AAGCTGGGAA GACGAAGTCC ATACCGATCT GGAGTGGAAC GGCGATATCA CCCATCAGGT AGACGGTCAC CGACAGCTGG CACGCGTCAT AGAGGCCATC GATTGCCTGC CGACGAACAT GCAGAAGGTT CTGGAAGTTT CGCTGGAAAT GGACGGCAAT TATCAGGAAA CCGCCAACAC GCTCGGTGTT CCGATCGGCA CTGTCCGCTC CCGACTGTCC CGGGCGCGGG TGCAGCTCAA GCAACACATA GACCCGTTCG CCTGA
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Protein sequence | MLPNLVILDA TEPRQPSSSA GIRQLTADQV QMLRAFIQKR VKNADDVDDI LQCVFLEALR NEHKFQHASK PQTWLCGIAL NLIRNHFRKM YRQPYQESWE DEVHTDLEWN GDITHQVDGH RQLARVIEAI DCLPTNMQKV LEVSLEMDGN YQETANTLGV PIGTVRSRLS RARVQLKQHI DPFA
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