| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1214 |
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| Symbol | |
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| ID | 3366708 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 1370403 |
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| End bp | 1371377 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637651555 |
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| Product | type III secretion protein HrpQ |
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| Protein accession | YP_234306 |
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| Protein GI | 66044465 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02500] type III secretion apparatus protein, YscD/HrpQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.35063 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.65254 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGAAT TACGCGTACT GAACGGCCAG CACCAAGGCG CGGCATTACC GCTGATCGGT
GAGCAATGGT CGATTGGCTC TGCCGGGCAA CACGATCTGG CGCTGGACGA TGCGGGCGTG
GAAAGCCTGC ATTGCCGCCT GCAACGTGTC GACGACAACT GGACACTGAA CGCTGAACAA
GGCGCGGTCT GCGACGAACA GGGCAACGCC CGGCCGAGCA TCGACCTGAC GCTCAATAAC
GCCTTCATGC TGGGTTCGGT GTGGCTGTGC GTTTCGCCTG CAGGCGATGA GTGGCCCTCG
GTGCCCGCCG TGATTCCCAA ACAGCCTGAG GCCGAATCCG GGCAGGCACG CAACGACGTG
CCGCTGGAGA AGGTCAAGTC CCGCTCGCAG TTTCTCAACC GCACCACGGG CATCATCGCC
GGGCTGCTGG TGGGCGTCAT CGGCAGCGCC TGGAGCCTGA CCCGCCCGCC CGCTATTGCG
ATGGATCAGA GCCCGGCGCA CCTGGCGGCC GCCACGACAG AGGCCTCGCC CGATACACCC
AAGGCGCCAG CCAGGGCGGC AAACCCTGTG ACCGACAACC GCATACGCCT GAGCAGCGCA
GATGCCGTCC GCCACCAGTT GAGCACCATG CTCAGCGACC GTCTGCTGAC CGACGTCAGC
GTGGAAGAGA CGCCCGACGG GCTGATTCTC AACGGCGATC TGAAAGAAGA ATCGCTGCTG
GTCTACCAGC GCATGCTTCA GCGCTTCAAG GCCCTGTACG ACTCGCCGGT CACCGTTCTG
GACAACGTGG GCAGCAATCG CAACACCCTG CCCTTTGTGG TGGTTCAGAT CATGACCGGG
CCGCATGCGC ACCTGGTGAC TGCCGACGGT CGACGTGTGT ACGTAGGCGA TGAAGTGGAT
GGCCTGCGCC TCACCCGTAT CGACAATCAG CGTCTGCAAT TCGACGGTAA TCGCCATATC
GAGGTGAACT GGTGA
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| Protein sequence | MFELRVLNGQ HQGAALPLIG EQWSIGSAGQ HDLALDDAGV ESLHCRLQRV DDNWTLNAEQ
GAVCDEQGNA RPSIDLTLNN AFMLGSVWLC VSPAGDEWPS VPAVIPKQPE AESGQARNDV
PLEKVKSRSQ FLNRTTGIIA GLLVGVIGSA WSLTRPPAIA MDQSPAHLAA ATTEASPDTP
KAPARAANPV TDNRIRLSSA DAVRHQLSTM LSDRLLTDVS VEETPDGLIL NGDLKEESLL
VYQRMLQRFK ALYDSPVTVL DNVGSNRNTL PFVVVQIMTG PHAHLVTADG RRVYVGDEVD
GLRLTRIDNQ RLQFDGNRHI EVNW
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