| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1186 |
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| Symbol | |
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| ID | 3366680 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 1340413 |
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| End bp | 1342569 |
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| Gene Length | 2157 bp |
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| Protein Length | 718 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637651527 |
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| Product | type III effector HopM1 |
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| Protein accession | YP_234278 |
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| Protein GI | 66044437 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0707254 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGGCA CACGAGTCGG CGGATCAGGC AGTACCGAAA TCGTTCAGGC GAACCAGCCG
CAGCCGTCTG CCGCTGTCGC CCAGGCTCAT CCACACGCGG TAAGCCCGAG CAGCAACCCG
CCGCTGACCG CCAGCCAGTC GGCCGCGCAA GCGCCGGAAA GCTCGGCGGC CGGTGCCGCT
CGCCTGCCAG TCGCGCCGCG ACATCTGCCG ACATTGGAGA AGTTTCGTGC CGAACAGCCC
ACCGTACAAG GCACTTCCAC GCCGACTATC AGCGCTAACG CGGCCCTGCT GATCGGCAGT
CTGTTGCAGT CTGAAAAACT GCCCTTCGAG GTCATGGCCG CCCGTTTGTC GCCTGAGCGT
TATGCGTTGC AGCAGTTTCA CGGCTCCGAT TTACAGCAAA TGCTCGGACG ATTCGCTGAG
CCAGGGCATC TGCCAGGCAA GGCCGAGACC GAACAACTGA TCAAGGGCTT TGCCCGGTCG
CTCGCAGACC AGCTGGAGCA CTTCCAGCTC ATGCATGACG CGACGGCTGA GGCATTCGGC
CCCGGAGGGC TGCGCGACCG CAACACACTG GCGGTCAGTC AAGCGGCGCT TGGCGAATAC
GCCGGTCGGG CGAGTAAATC CATCGAAGCG GGGCTGAACC ACAGTCTCGC GGTGCTGGAC
GAGCGCATCG CCGCGCTGGA CAGCCAGTTG GAGGGCGCCA CTGAGGACAG CAGACCGGTT
TTGCTGATGG ACAGGCAGGC GCTGGAAACG GCCAGGGCGA TGCTGAGCGA CCTGCACGTC
GACTTCTGCA AATCGCCTGA AGCCAAGCGG TTGAGTGCCG TTGCCGCTCA CACGCAAATG
GATGCTCTGA TCGACAAGCT GAACGTTGAT CGCAGCTCGG TCGGCGGCTG GAAGGGGATC
GGTCCGATCG TCGCGGCAGC GGTGCCGCAG TTTATGGTGT CCATGCTCCA CCTGGGGTAT
ATCCGCACGG CCACCAGTGA CGCGATGAAA GATGCCGTTC CCGAAAAAAG CGCCGACGCC
AGCATGAAGA GGGCCCTGGC CGTAGGACTG ACTGCCGGGG TGGCTCACGA GGGCGTTACC
AACCTCTTGA AGCCGATGGT GCAGGCCGGG TTTCAGAAAG CCGGCCTCAA CGAGCGGCTG
AATATGGTGC CGCTCAAGGG TATTGATACC GACTCGGTGA TTCCCGACCC TTTCGAGTTG
AAGAACGACA ACGGCGCACT GGTCAGAAAA ACGCCTGAGG AAGCCGCTGA GGACAAAGCC
TTCGTCGCAA GCGAGCGAGC GGTTTTGAAT CAGAAAAAGG TTCAGGTTTC GTCTACCCAT
CCACTGGGTG AGATGATCCC CTACGGCGCC TTTGGTGGCG GGCAGGCGGT ACGCCAGATG
CTCAATGATT TCAATCTGCT CAATGGCCAG ACCCTGTCGG CCAGAGCGGT GACCTCCGGG
ATCGCCGGGG CCATATCAGC CACCACCCAG ACCATTGCAC AGCTGAACTC GACCTATGTC
GATCCGCGCG GGCGCAAGAT CCCGGTCTTC ACCCCGGACC GCGCCAATGC CGACCTGGGC
AAGGACCTGG CCAAAGGCCT GGACCTTCGC GAACCGGCGG TACGCACCGC GTTCTACAGC
AAGGCTGTTT CAGGTGTGCA GAGCGCAGCG CTGAACGGCG CGCTACCATC GGTTGCCGTC
CAGCCCCAAG GTGCATCCGG CACGCTCAGC GCGGGGAATA TCATGCGCAA CATGGCGCTG
GCGGCAACCG GTTCGGTGTC TTACCTGTCG ACCCTGTATG CCAACCAGTC GGTCACGGCC
GAGGCCAAGG CCCTGAAAGA GGCGGGCATG GGCGGCGCAA CGCCAATGGT AGCTCGCACT
GAAACCGCCC TGAGCAACAT CCGCCATCCG GACAGAGCTT CACTGCCGCA TACGTTCCAG
CCGGATACCC TGGGTGGCGT CCCCAGGGCC GTGGAAAACG CCTATCACAT GGCCCGGGGC
GCGCTGCAAT TACCGACCCA GGTGGTGGTC GATACGGTGC GTGTCGTGGA AGACGGCGTA
GCAAGCGGGG TGTCCTCGTT GCGCGATGCA CATAAACCAG CGGAAACATC ATCGCCAACA
GCTGATGACG CCGCTGCTGT CGAACTGACG GCGATGGAGG AGGGCCGCCG ACGCTGA
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| Protein sequence | MIGTRVGGSG STEIVQANQP QPSAAVAQAH PHAVSPSSNP PLTASQSAAQ APESSAAGAA
RLPVAPRHLP TLEKFRAEQP TVQGTSTPTI SANAALLIGS LLQSEKLPFE VMAARLSPER
YALQQFHGSD LQQMLGRFAE PGHLPGKAET EQLIKGFARS LADQLEHFQL MHDATAEAFG
PGGLRDRNTL AVSQAALGEY AGRASKSIEA GLNHSLAVLD ERIAALDSQL EGATEDSRPV
LLMDRQALET ARAMLSDLHV DFCKSPEAKR LSAVAAHTQM DALIDKLNVD RSSVGGWKGI
GPIVAAAVPQ FMVSMLHLGY IRTATSDAMK DAVPEKSADA SMKRALAVGL TAGVAHEGVT
NLLKPMVQAG FQKAGLNERL NMVPLKGIDT DSVIPDPFEL KNDNGALVRK TPEEAAEDKA
FVASERAVLN QKKVQVSSTH PLGEMIPYGA FGGGQAVRQM LNDFNLLNGQ TLSARAVTSG
IAGAISATTQ TIAQLNSTYV DPRGRKIPVF TPDRANADLG KDLAKGLDLR EPAVRTAFYS
KAVSGVQSAA LNGALPSVAV QPQGASGTLS AGNIMRNMAL AATGSVSYLS TLYANQSVTA
EAKALKEAGM GGATPMVART ETALSNIRHP DRASLPHTFQ PDTLGGVPRA VENAYHMARG
ALQLPTQVVV DTVRVVEDGV ASGVSSLRDA HKPAETSSPT ADDAAAVELT AMEEGRRR
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