Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1172 |
Symbol | |
ID | 3366666 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 1326317 |
End bp | 1326796 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637651513 |
Product | regulatory proteins, AsnC/Lrp |
Protein accession | YP_234264 |
Protein GI | 66044423 |
COG category | [K] Transcription |
COG ID | [COG1522] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.793215 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCAAC CGACATTAAG CCCGATAGAT GTAAGGATCC TCACGGCGCT GCAGCAGGAT GGCCGTATCA CCAACCAGAC CCTGGCCGAC CAGATCGGCA TGTCTGCCTC GCCCTGTTGG CGACGGGTCA GGCAGCTGGA AGAACATCGC TATATCCAGG GTTACAGAGC CGTACTGGAC CGCCGCAAGA TCGGGCTTGG CGTCATGGTG TTCATTCGTA TCAGCATCGA CAGTCATAGT GAGGCCGAGG CCAGAAAATT CGAGAAGGAA GTCATGCAGC TGGAAGATGT CGTGGCGTGC TACAGCATCG GTGGCGATGC GGACTTTCTG CTTCAGGTCG TAGCGCCCGA TCTGGATTCC TTTGCTGACT TCGCCATGAC CGTGGTCAGA CGATTACCCG GCATCAAGGA AATGCAGAGC ATGTTCGTCC TCAAGGAAAT AAAACCGTTC GTCTCGTTCC CGGTAAAGCA GCCCGCATAG
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Protein sequence | MTQPTLSPID VRILTALQQD GRITNQTLAD QIGMSASPCW RRVRQLEEHR YIQGYRAVLD RRKIGLGVMV FIRISIDSHS EAEARKFEKE VMQLEDVVAC YSIGGDADFL LQVVAPDLDS FADFAMTVVR RLPGIKEMQS MFVLKEIKPF VSFPVKQPA
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