Gene Psyr_1172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1172 
Symbol 
ID3366666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1326317 
End bp1326796 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content56% 
IMG OID637651513 
Productregulatory proteins, AsnC/Lrp 
Protein accessionYP_234264 
Protein GI66044423 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.793215 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAAC CGACATTAAG CCCGATAGAT GTAAGGATCC TCACGGCGCT GCAGCAGGAT 
GGCCGTATCA CCAACCAGAC CCTGGCCGAC CAGATCGGCA TGTCTGCCTC GCCCTGTTGG
CGACGGGTCA GGCAGCTGGA AGAACATCGC TATATCCAGG GTTACAGAGC CGTACTGGAC
CGCCGCAAGA TCGGGCTTGG CGTCATGGTG TTCATTCGTA TCAGCATCGA CAGTCATAGT
GAGGCCGAGG CCAGAAAATT CGAGAAGGAA GTCATGCAGC TGGAAGATGT CGTGGCGTGC
TACAGCATCG GTGGCGATGC GGACTTTCTG CTTCAGGTCG TAGCGCCCGA TCTGGATTCC
TTTGCTGACT TCGCCATGAC CGTGGTCAGA CGATTACCCG GCATCAAGGA AATGCAGAGC
ATGTTCGTCC TCAAGGAAAT AAAACCGTTC GTCTCGTTCC CGGTAAAGCA GCCCGCATAG
 
Protein sequence
MTQPTLSPID VRILTALQQD GRITNQTLAD QIGMSASPCW RRVRQLEEHR YIQGYRAVLD 
RRKIGLGVMV FIRISIDSHS EAEARKFEKE VMQLEDVVAC YSIGGDADFL LQVVAPDLDS
FADFAMTVVR RLPGIKEMQS MFVLKEIKPF VSFPVKQPA