Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1142 |
Symbol | |
ID | 3366636 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 1293302 |
End bp | 1295314 |
Gene Length | 2013 bp |
Protein Length | 670 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637651483 |
Product | cytochrome-c oxidase |
Protein accession | YP_234234 |
Protein GI | 66044393 |
COG category | [C] Energy production and conversion |
COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
TIGRFAM ID | [TIGR02843] cytochrome o ubiquinol oxidase, subunit I |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.303035 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTGGCA AATTAAGTCT GGAAGCGGTG CCGTTCCACG AGCCCATAGT CATGGTGACA CTTGCCATGA TCGCGCTCGG CGGCATTGCG GTTGTCGGGT TGATCACCTA TTTCCGCAAG TGGACGTACT TGTGGTCTGA GTGGCTGACC TCTGTCGACC ACAAGAAAAT CGGCGTGATG TACATCGTCG TTGCCATGGT CATGCTGCTG CGCGGTTTTG CCGACGCGAT CATGATGCGT ACCCAACTGG CGATGGCCCA GAACGGTTCC GAAGGGTTCC TTCCGCCTGA ACACTATGAC CAGATCTTCA CCGCTCACGG TGTGATCATG ATCATCTTCA TGGCGATGCC GTTCTTCACG GGTCTGATGA ACATCGTTCT GCCTCTGCAG ATCGGCGCTC GCGACGTGGC GTTCCCGTTC CTGAACTCCC TGAGCTTCTG GCTGCTGGTC GCAGGTATGC TGCTGATCAA CATCTCCCTG GGTGTCGGTG AGTTCGCCAA GACCGGCTGG GTCGCGTATC CGCCTCTTTC CGGGTTGCAA TACAGTCCTG GCGTAGGGGT TGACTACTAC ATCTGGGCGC TACAGTTATC CGGCTTGGGT ACGACGCTGA CGGGGGTCAA CTTCCTCGTG ACCGTGCTGA AGATGCGTAC CCCTGGCATG AAACTGATGG ACATGCCGAT CTTCACCTGG ACCTGCACCT GGGCAAACAT CCTGATCGTG GCTTCGTTCC CGATCCTGAC CGCTACCCTG GCGTTCCTGA CCCTTGACCG CTACCTGGAC TTCCACATTT TCACGAACGA AATGGGCGGT AACCCCATGA TGTACGTGAA CCTGTTCTGG GCGTGGGGTC ACCCTGAGGT GTACATCCTG ATCCTGCCGG CCTTCGGCGT GTTCTCGGAA GTCATCTCGA CGTTCTCCGG CAAGCGTCTG TTCGGCCACA AGTCGATGAT CTTCGCCTCC GGTGCGATCT GTATCCTGGG CTTCATGGTC TGGCTGCACC ACTTCTTCAC CATGGGGGCG GGTGCCAACG TCAACGCCTT CTTCGGTCTG GCGACGATGC TGATTGCGAT CCCGACGGGT GTGAAGCTGT TCAACTGGCT GTTCACCATG TATCAGGGCC GTCTGCGCTT CACTGCGCCG GTGCTCTGGA CCCTGGGCTT CATGGTCACC TTCTCGATCG GCGGCATGAC CGGCGTTCTG TTGGCGATCC CGGGTGCTGA CTTCGTGCTG CACAACAGCC TGTTCGTAAT CGCTCACTTC CACAACGTCA TCATCGGCGG TGCGGTATTC GGTTACATCG CCGGCTTCGC GTTCTGGTTC CCTAAAGCGT TCGGTTTCAC CCTGAACGAG AAGTGGGGCA AGGCAGCGTT CTGGTTCTGG ATCGTCGGCT TCTTCGTCGC ATTCATGCCG CTTTACGCGC TGGGCTTCCT GGGCATGACC CGTCGTCTGA ACGCTACCGA CATGCCAGAG TGGAACATCT ACCTGGACGT CGCGCTGTTC GGCGCCGTGC TGATTGCCAT GGGTATCGCT TCGCAGCTGA TCCAGCTGTT CGTGAGTATC CGTGACCGCG ACAACAACCG CGATCTGACC GGTGACCCAT GGAATGGCCA TACCCTGGAA TGGTCCACTT CTTCGCCTCC ACCGTTCTAC AACTTTGCCG AGCTGCCAAA AGCTGACGAC ATCGATCCGT TCACCGATGC GAAACGTGCC GGTACCGCTT ACAAGGTTCC TGCCCGCTAC TCGGCGATCC ACATGCCTAA CAACACGGCT ACCGGCCTGT ACATGGGTAT GTTGCTGACG GTCTTCGGCT TCGCATTCAT CTGGCACATC TGGTGGCTGG TAGGCGCAAG CCTGGTCGCG ACCATTGCAG TCTTCGTTGC TCACGCTGTC CGTGACGACC AGGGCTACAT GGTGCCTGCT GAAGATGTAG CGCGTATTGA AGGTGAGCAT CACAAGGTCC TGGCGGCCAA CGGTGCATAC ACTCCTGTCA AGTCCTCGCT GGAACAGGTT TAA
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Protein sequence | MFGKLSLEAV PFHEPIVMVT LAMIALGGIA VVGLITYFRK WTYLWSEWLT SVDHKKIGVM YIVVAMVMLL RGFADAIMMR TQLAMAQNGS EGFLPPEHYD QIFTAHGVIM IIFMAMPFFT GLMNIVLPLQ IGARDVAFPF LNSLSFWLLV AGMLLINISL GVGEFAKTGW VAYPPLSGLQ YSPGVGVDYY IWALQLSGLG TTLTGVNFLV TVLKMRTPGM KLMDMPIFTW TCTWANILIV ASFPILTATL AFLTLDRYLD FHIFTNEMGG NPMMYVNLFW AWGHPEVYIL ILPAFGVFSE VISTFSGKRL FGHKSMIFAS GAICILGFMV WLHHFFTMGA GANVNAFFGL ATMLIAIPTG VKLFNWLFTM YQGRLRFTAP VLWTLGFMVT FSIGGMTGVL LAIPGADFVL HNSLFVIAHF HNVIIGGAVF GYIAGFAFWF PKAFGFTLNE KWGKAAFWFW IVGFFVAFMP LYALGFLGMT RRLNATDMPE WNIYLDVALF GAVLIAMGIA SQLIQLFVSI RDRDNNRDLT GDPWNGHTLE WSTSSPPPFY NFAELPKADD IDPFTDAKRA GTAYKVPARY SAIHMPNNTA TGLYMGMLLT VFGFAFIWHI WWLVGASLVA TIAVFVAHAV RDDQGYMVPA EDVARIEGEH HKVLAANGAY TPVKSSLEQV
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