Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1139 |
Symbol | |
ID | 3366633 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 1289881 |
End bp | 1290777 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637651480 |
Product | response regulator receiver:CheW-like protein |
Protein accession | YP_234231 |
Protein GI | 66044390 |
COG category | [K] Transcription [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [COG0835] Chemotaxis signal transduction protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.455632 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAAGA ACGTCCGAGC AGATTCACTT TCGCTGCTCC TCTTCACGTT GCGCAGCGGC AAGCTGATGG CGATCAACCT GCTCAAGGTC AGCGAGATCA TTCCCTGCCC GCCTCTGACC CATCTTCCCG AATCGCACCC ACACGTCAAA GGTATTGCGA CGCTACGTGG CTCGTCACTG TCGGTTATCG ATCTGAGTCG TGCGATCGGC GAGCGTCCGC TGGCCGATCC CGACGGTGGC TGCCTGATCG TCACGGATGT CAGCCGCTCG AAACAGGGCC TGCACGTTCA GGCCGTCAGC AAGATTGTGC ATTGCCTGAC CACCGACATC CGCCCACCGC CCTACGGGTC GAGCAGCAAG TCGTTCATCA CCGGGGTTAC TCAGGTCGAC GGCGTGCTGG TGCAAGTACT GGACATCGAA AAAGTGATCC ACGGCATCGC CCCTGCACAG ATCGTCGTAC AGTCAACGGA GCTGGCCAAA GAGGATGCGG AACTGCTGAG CAAGGCGCGG ATTCTGGTCG TCGATGACAG TCAGGTTGCC CTGCAGCAGT CGATCATTAC CTTGCGCAAT CTCGGCCTCG AATGCCACAC GGCGCGCAGT GCCAAAGAGG CTATCGACGT TCTGCTCGAC CTGCAGGGTA CTGCGCGACA GATCAACGTG GTGGTGTCCG ATATCGAGAT GTCGGAGATG GACGGCTATG CCCTCACCCG CACGCTCCGG GATACGCCGG ACTTCAGTGA TCTGTACATT CTGCTGCACA CCTCGCTCGA CAGCGCGATG AACAGCGAGA AGTCACAGAT CGCCGGGGCC AATGCCGTGT TGACCAAGTT CTCGTCACCC GAGTTGACCA AATGCCTGAT CGAGGCCGCA CGTACGGTAG TCGCCCAAGG GCTCTGA
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Protein sequence | MSKNVRADSL SLLLFTLRSG KLMAINLLKV SEIIPCPPLT HLPESHPHVK GIATLRGSSL SVIDLSRAIG ERPLADPDGG CLIVTDVSRS KQGLHVQAVS KIVHCLTTDI RPPPYGSSSK SFITGVTQVD GVLVQVLDIE KVIHGIAPAQ IVVQSTELAK EDAELLSKAR ILVVDDSQVA LQQSIITLRN LGLECHTARS AKEAIDVLLD LQGTARQINV VVSDIEMSEM DGYALTRTLR DTPDFSDLYI LLHTSLDSAM NSEKSQIAGA NAVLTKFSSP ELTKCLIEAA RTVVAQGL
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