Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1058 |
Symbol | |
ID | 3366552 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 1197396 |
End bp | 1199006 |
Gene Length | 1611 bp |
Protein Length | 536 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637651401 |
Product | parallel beta-helix repeat-containing protein |
Protein accession | YP_234152 |
Protein GI | 66044311 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0674089 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAGTC ATACAAGCAA CGGGCGCAGC CGGCACTGGC CGCACGCCCT GCTCGAAAGC GCACTGCTGA CCAGCGCTCT GCTGCTGGCC AGCGGTGTGG CGCTGGCCAA CGCGCCTGTC GTACCCGACA CACAGAAGGC GGTGGTCAAG GAGCTGCACC AGGCCAAGAC CTACACCATC ACCAGCCCGC CCACCGCGCC GCTGGAAATG GCCAAGCCGG TACTGCCCGA CCTCAAGGGC TATACCGCTG AAGCGGCGCT GAAAAAGATC GTGCGCAACA AGCCGGGCAA GGTCACTGTT TCGCGGATGA TGGAAGAAAC CGGCCTGAAG GAATTTATCG GCGGTGACAA CAAGATGGCC GAATGGGTCA ACCGTCAGCG CGGCATCCCG CAGGCCATCA TGATTTCCGA CGGCTACGTG AACCTGCAGG ACCTGGCCAA GAAAGTGCCC AAGCAGTTCC TCAACGAAGT CTCGCCAGGT GTCTACGTGG CGCGCCTGCC GATCCTGATC AAGGAAACCG GGACCTTCGA GATCGACAGC AAGACCAAGG AATTGCGTCT GTCTCAGGAA AAGGGTTCGT TCATCGTCAG TGAAGGCAAG ATGCTGATCA CTCACACTCA GGTCAATGGC TGGAGTGAAA CCCGCAACAG CCTGGCGACC TATCGCAAGC CTGAAGAGTT TCGCCCGTTC CTGCTGACCT GGGGTGGCTC GGAAACCTGG ATCGCCAACA CCAAAATGGC GAGCCTGGGC TACGACCAGA GCAAGTCCTA CGGCATCAGT ATTTCCCAGT ACACGCCCAA CACCGCGAAG GTGCTCAAGC GTCCCGAACC GACCGGCTGG ATCATCGATT CAGAATTCTC GGACATGTGG TACGGCTTCT ACTGCTATGA AACCCGCGAC TTCGTGGTCA AGGGCAACAC CTACCGCGAC AACATCATTT ACGGCATTGA CCCGCACGAC CGTTCGCACG GTCTGATCAT CGCCGAAAAC GACGTTTACG GGACCAAGAA GAAGCACGGC ATCATCATTT CCCGGGAAGT GGACAACAGC TTCATCTTCC GCAACAAGAG CCACAACAAC AAATTGTCCG GCGTGGTTCT GGACCGTAAC AGCGTCGGCA ACATCGTCGC CTACAACGAG ATTTACCAGA ACCACACCGA CGGCATCACC CTGTACGAAA GCGGCAACAA CCTGCTGTGG GGCAATCGCG TGATCGCCAA CCGCCGCCAC GGTATCCGCG TACGTAACAG TGTGAACATC AAGCTGTACG AGAACGTCGC CATGGGCAAC GGCCTGATGG GCGTTTACGG CCACATCAAG GACTTGAGCG ACACCGACCG CGACATCGAG CTCGACCCGT TCGACGCTCA GGTATCGCTG ATCATGGTTG GCGGCGAACT GTCCAGCAAT GGCTCCGGCC CGCTGTCCAT CGACTCGCCA CTGAGTGTCG AGCTGTATCG CGTCTCGATG CTGATGCCTA CCAAAGAAGT CGGCATCAGC CTCAACGGCG TCCTCGGTGA GCGCCAGGAC GAAATCCTCG ACCTGCTGGT ACGCCAGAAA AAAGCCGTAT TGATCGACCC CGTCGAAAGC CAGACCGAGC TGCGGGAATG A
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Protein sequence | MNSHTSNGRS RHWPHALLES ALLTSALLLA SGVALANAPV VPDTQKAVVK ELHQAKTYTI TSPPTAPLEM AKPVLPDLKG YTAEAALKKI VRNKPGKVTV SRMMEETGLK EFIGGDNKMA EWVNRQRGIP QAIMISDGYV NLQDLAKKVP KQFLNEVSPG VYVARLPILI KETGTFEIDS KTKELRLSQE KGSFIVSEGK MLITHTQVNG WSETRNSLAT YRKPEEFRPF LLTWGGSETW IANTKMASLG YDQSKSYGIS ISQYTPNTAK VLKRPEPTGW IIDSEFSDMW YGFYCYETRD FVVKGNTYRD NIIYGIDPHD RSHGLIIAEN DVYGTKKKHG IIISREVDNS FIFRNKSHNN KLSGVVLDRN SVGNIVAYNE IYQNHTDGIT LYESGNNLLW GNRVIANRRH GIRVRNSVNI KLYENVAMGN GLMGVYGHIK DLSDTDRDIE LDPFDAQVSL IMVGGELSSN GSGPLSIDSP LSVELYRVSM LMPTKEVGIS LNGVLGERQD EILDLLVRQK KAVLIDPVES QTELRE
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