| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1057 |
|---|
| Symbol | |
|---|
| ID | 3366551 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 1195942 |
|---|
| End bp | 1197381 |
|---|
| Gene Length | 1440 bp |
|---|
| Protein Length | 479 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637651400 |
|---|
| Product | alginate biosynthesis protein AlgX |
|---|
| Protein accession | YP_234151 |
|---|
| Protein GI | 66044310 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0893074 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.4674 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACGCAC ATCTGATCAA GCTGTTGAGC CTGTCCAGCC TCACCGCCGC CTTGATGGCC
GCCGCGGGTG TCGCTCGGGC AGACGACTCG CAAGCGCCGA CGTTCAAGGC CGAGCCTTGC
TGCTCGCTGT GCCCGGCCGC GCATGACGCG AAAAACTACA CCACGCGCTA TCAGCAGAAC
TTCACCACGC TGGTCCAGGC TCAGGGCGAC TGGCTGTTCC GGACTCAGGA AGACCTGCGC
ACCGAGTTCG ATACCACGCC TGCCGGCTAT CGCCGCATGA AAGAACTGCA CGATGCGTTC
AAGAGCAAAG GCGTCGAACT GGTCGTGGTT TATCAGCCAA CCCGTGGTCT GGTGGATCGC
AACAAATTGT TCCCGGCCGA ACGCGACAAG TTCGACTACG ACAAGGCGCT GAAAAACTAT
CAGGCCATGC TCGGCCGCTT CAGCAAGATG GGCTACTGGG TGCCTGACCT GTCGCCGTTG
ACCAACGAGC AGCAGGCGCA TGATTTCTAC TTCCGCGGTG ACCAGCACTG GACGCCGTAT
GGCGCGCAGC GTACGGCGAA GATCGTTGCC GAAACCGTGA AGAAAGTTCC GGGTTATAGC
GACATCCCCA AGCGTGAGTT CGAAAGCCAT ATTTCCGGGC GCATGGGCAA GACGGGCACT
TTGCACAATA TGGCGGGTCA ATTGTGCGGC ACCAGCTACG CGATCCAGTA CATGGACCAG
TTCACCACCG AGCCCAAGGG TGAGGCGGGC GACGGCGACC TGTTCGGCGA TTCCGGTAAC
CCGGAAATCA CCCTGGTCGG TACCAGCCAC AGCGGCAAGA ACTACAACTT CGCTGGCTTC
CTCCAGGAAT ACATGGGCGC TGACGTGTTG AACGTGGCGT TCCCTGGTGG TGGCCTGGAA
GGTTCGATGC TCCAGTACCT GGGCAGTGAA GACTTCCAGA AGCGTCCGCC GAAAATTCTC
ATCTGGGAAT TCTCGCCGCT GTATCGCCTG GATCAGGAGA CCATCTATCG CCAGATGATG
TCGCTGCTGG ACAACGGCTG TGAAGGCAAG CCTGCCGTGA TGAGCGCCAG CACCACCCTC
AAGCCGGGCA CCAACGAAGT GTTGGTCAAC GGCAAGAATG GCATCAAGGA CATTCGCAAC
GGCAGCAATC AGATCGACAT CAAGTTTGAC GACACCTCGG TGAAAGTCCT TCAGGCCAGG
CTCTGGTACA TGAACGGTCG CCACGAGGAT CTGAAAATCG AGAAACCGGA AACGTCAGAC
ACCGATGGAC GCTTCGCCTT TGAATTGCGC GAGGATGAGG ATTGGGCCAA CCAGCAACTG
CTGGCGCTGG AAATCCAGGG ACCGGAAGCA GGCACGGCAC CACAAAAAGT CGAAGCCAAA
GTATGCAAAC GCAACGTGTT CCCGAGCGCT GCGACACACA CCGCTCAAGC CGGACTATGA
|
|---|
| Protein sequence | MHAHLIKLLS LSSLTAALMA AAGVARADDS QAPTFKAEPC CSLCPAAHDA KNYTTRYQQN
FTTLVQAQGD WLFRTQEDLR TEFDTTPAGY RRMKELHDAF KSKGVELVVV YQPTRGLVDR
NKLFPAERDK FDYDKALKNY QAMLGRFSKM GYWVPDLSPL TNEQQAHDFY FRGDQHWTPY
GAQRTAKIVA ETVKKVPGYS DIPKREFESH ISGRMGKTGT LHNMAGQLCG TSYAIQYMDQ
FTTEPKGEAG DGDLFGDSGN PEITLVGTSH SGKNYNFAGF LQEYMGADVL NVAFPGGGLE
GSMLQYLGSE DFQKRPPKIL IWEFSPLYRL DQETIYRQMM SLLDNGCEGK PAVMSASTTL
KPGTNEVLVN GKNGIKDIRN GSNQIDIKFD DTSVKVLQAR LWYMNGRHED LKIEKPETSD
TDGRFAFELR EDEDWANQQL LALEIQGPEA GTAPQKVEAK VCKRNVFPSA ATHTAQAGL
|
|---|
| |