| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1048 |
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| Symbol | |
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| ID | 3366542 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 1184228 |
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| End bp | 1185088 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637651391 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_234142 |
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| Protein GI | 66044301 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.233683 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGT TCTTCAGTCT GTTTGCCACG TTGCTGGTGC TGGCAATCGC GCTCTGGATC
GGTCGCGCGT TATGGGTCGA CTACATGGAT ACGCCCTGGA CCCGCGATGG TCGGGTACGC
GCCGACATCA TCAACGTGGC TGCCGATGTG TCCGGCACCG TGGTCGATGT CCCGGTGCAT
GATAACCAGT GGGTGAAACG TGGCGATCTG CTGATGCAGA TCGACCCGGA GCATTACCGG
ATCGCCGTGA AGCAGGCGCA GGCGTTGCTG GCTTCACGCA AGGCGACCTG GGAGATGCGC
AAACTGAATG CCAGGCGGCG TGCCGATATG GATGAGCTGG TCATCTCGGC AGAAAATCGT
GACGACGCGA GCAACGTTGC CACCTCGGCC CTGGCCGATT ACCAGTTGGC CCAGGCGCAA
CTGGAGGCGG CCGAACTCAA CCTGTCCCGC ACGCGGGTAC TGGCGGCGGT GGACGGTTAC
GTCACCAACC TCAATGTGCA TCGTGGTGAC TATGCGCGCA TCGGCGAAGC GAAGATGGCC
GTGGTCGACA TGAACTCGTT CTGGGTCTAC GGCTTCTTCG AGGAAACCAA GTTGCCGCAC
CTGAAAGTGG GCGACCCTGC GGATCTGCAA CTGATGAGCG GCGAGGTGCT CAAGGGCCAT
GTCGAAAGCA TCGCCCGCGG CATCTACGAC CGTGACAACC CGCAAAGCCG AGAACTGATC
GCCGACGTGA ACCCGACCTT CAACTGGGTG CGCCTGGCCC AGCGCGTGCC GGTGCGTATC
CACCTCGATC AAGTACCGCA GGATGTGTTG CTGGCGGCGG GGATGACCTG CACGGTGATT
GTCAGGCCGG TAGACGGCTG A
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| Protein sequence | MKKFFSLFAT LLVLAIALWI GRALWVDYMD TPWTRDGRVR ADIINVAADV SGTVVDVPVH
DNQWVKRGDL LMQIDPEHYR IAVKQAQALL ASRKATWEMR KLNARRRADM DELVISAENR
DDASNVATSA LADYQLAQAQ LEAAELNLSR TRVLAAVDGY VTNLNVHRGD YARIGEAKMA
VVDMNSFWVY GFFEETKLPH LKVGDPADLQ LMSGEVLKGH VESIARGIYD RDNPQSRELI
ADVNPTFNWV RLAQRVPVRI HLDQVPQDVL LAAGMTCTVI VRPVDG
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