Gene Psyr_1006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1006 
Symbol 
ID3366500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1140362 
End bp1141267 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content58% 
IMG OID637651349 
Productputative acyltransferase 
Protein accessionYP_234100 
Protein GI66044259 
COG category[I] Lipid transport and metabolism 
COG ID[COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.829221 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTTCC TGCCTGCCCC GTTACGCGGC GTCATTGCCT CGCTGTTGCT GGCGCTGAAC 
ACCATCGTCT GCTGCACGGT GCTGTTCGCG GTCACGATCC TCAAGATCTG CCTGCCCTTC
TCTGCGGCAC AGTGCTTCAC CGACTGGCTG ATGAGCCACA TCCATGAAAC CTGGATCGGC
AACAACAATG CCTGGATCAG ACTGCTGTGC CACACCCGCT GGCACCTGAG CGGCCTGGAA
GGGCTGGATT ACCAGCACTC GTATCTGGTC ACCAGCAATC ACCAGAGCTG GGTCGACATC
ATGGTCTTGC AGTACGTGCT CAACCGACGT ATTCGCCCCT TGAAGTTTTT CCTCAAGCAG
GAGTTGATCT GGGTTCCGGT GATCGGTCTG GCGTGGTGGG CGCTGGGCTT TCCGTTCATG
AAGCGCTACT CCAAGGCGTA CCTTGCCAAA CACCCGGAAA AGAAAGGCAA GGACCTGGAA
ACCACCCGCC GCACCTGCGC GAAGTTTCGC CATAACCCGG TGGGGATTTT CAACTTCGCA
GAAGGTACGC GCTTCACGGC CGGCAAACAC GCGCAACAGA ACTCGCCGTT TCGCCACCTG
CTCAAACCCA AGGCTGGCGG CATTGCCTTC GTGCTCGACG CGATGGGCGA ACAGCTGGAA
TCGATTGTCA ACGTGACCAT CCACTACCCG GCCGGGCAGC CCGGCTACTG GGACCTGCTG
TGCGGCAACG TGAAGGAAGT GGTCGCCCAC TTCGAAGAGA TCAAAATCCC GCAACAGTTT
CTCGGCAAAA ATTACGACCA GGACGGCGAA TACCGCCTGG AATTCCAGCA GTGGATCAAT
GCGTTGTGGG AAGAAAAAGA CCGGCTGCTG GACAGGCTGC ATGAGCAGTA TCCGGCGCCG
CATTGA
 
Protein sequence
MDFLPAPLRG VIASLLLALN TIVCCTVLFA VTILKICLPF SAAQCFTDWL MSHIHETWIG 
NNNAWIRLLC HTRWHLSGLE GLDYQHSYLV TSNHQSWVDI MVLQYVLNRR IRPLKFFLKQ
ELIWVPVIGL AWWALGFPFM KRYSKAYLAK HPEKKGKDLE TTRRTCAKFR HNPVGIFNFA
EGTRFTAGKH AQQNSPFRHL LKPKAGGIAF VLDAMGEQLE SIVNVTIHYP AGQPGYWDLL
CGNVKEVVAH FEEIKIPQQF LGKNYDQDGE YRLEFQQWIN ALWEEKDRLL DRLHEQYPAP
H