Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1006 |
Symbol | |
ID | 3366500 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 1140362 |
End bp | 1141267 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637651349 |
Product | putative acyltransferase |
Protein accession | YP_234100 |
Protein GI | 66044259 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.829221 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATTTCC TGCCTGCCCC GTTACGCGGC GTCATTGCCT CGCTGTTGCT GGCGCTGAAC ACCATCGTCT GCTGCACGGT GCTGTTCGCG GTCACGATCC TCAAGATCTG CCTGCCCTTC TCTGCGGCAC AGTGCTTCAC CGACTGGCTG ATGAGCCACA TCCATGAAAC CTGGATCGGC AACAACAATG CCTGGATCAG ACTGCTGTGC CACACCCGCT GGCACCTGAG CGGCCTGGAA GGGCTGGATT ACCAGCACTC GTATCTGGTC ACCAGCAATC ACCAGAGCTG GGTCGACATC ATGGTCTTGC AGTACGTGCT CAACCGACGT ATTCGCCCCT TGAAGTTTTT CCTCAAGCAG GAGTTGATCT GGGTTCCGGT GATCGGTCTG GCGTGGTGGG CGCTGGGCTT TCCGTTCATG AAGCGCTACT CCAAGGCGTA CCTTGCCAAA CACCCGGAAA AGAAAGGCAA GGACCTGGAA ACCACCCGCC GCACCTGCGC GAAGTTTCGC CATAACCCGG TGGGGATTTT CAACTTCGCA GAAGGTACGC GCTTCACGGC CGGCAAACAC GCGCAACAGA ACTCGCCGTT TCGCCACCTG CTCAAACCCA AGGCTGGCGG CATTGCCTTC GTGCTCGACG CGATGGGCGA ACAGCTGGAA TCGATTGTCA ACGTGACCAT CCACTACCCG GCCGGGCAGC CCGGCTACTG GGACCTGCTG TGCGGCAACG TGAAGGAAGT GGTCGCCCAC TTCGAAGAGA TCAAAATCCC GCAACAGTTT CTCGGCAAAA ATTACGACCA GGACGGCGAA TACCGCCTGG AATTCCAGCA GTGGATCAAT GCGTTGTGGG AAGAAAAAGA CCGGCTGCTG GACAGGCTGC ATGAGCAGTA TCCGGCGCCG CATTGA
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Protein sequence | MDFLPAPLRG VIASLLLALN TIVCCTVLFA VTILKICLPF SAAQCFTDWL MSHIHETWIG NNNAWIRLLC HTRWHLSGLE GLDYQHSYLV TSNHQSWVDI MVLQYVLNRR IRPLKFFLKQ ELIWVPVIGL AWWALGFPFM KRYSKAYLAK HPEKKGKDLE TTRRTCAKFR HNPVGIFNFA EGTRFTAGKH AQQNSPFRHL LKPKAGGIAF VLDAMGEQLE SIVNVTIHYP AGQPGYWDLL CGNVKEVVAH FEEIKIPQQF LGKNYDQDGE YRLEFQQWIN ALWEEKDRLL DRLHEQYPAP H
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