| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_0966 |
|---|
| Symbol | |
|---|
| ID | 3366460 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 1099569 |
|---|
| End bp | 1100471 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637651309 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_234060 |
|---|
| Protein GI | 66044219 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1090] Predicted nucleoside-diphosphate sugar epimerase |
|---|
| TIGRFAM ID | [TIGR01777] conserved hypothetical protein TIGR01777 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACATAT TGCTGACCGG TGGTACTGGT TTGATAGGAC GAGCGCTCTG CCGTTTCTGG
TCTGCCCAAG GCCATGAATT GACGGTATGG AGCCGAACAC CCGCCGATGT CGTCGAGCTG
TGCGGTCCCT CAGTGCGTGG CATTGCCAGC CTTGATGAGC TGGGCACGCA GCCGGTGGAT
GCAATCATCA ATCTGGCAGG CGCGCCCATT GCGGATCGTC CCTGGACCCG CAAGCGCCGT
CTGTTGCTGT GGGAGAGTCG CGTCGGCCTG ACCGAGCAAC TGCTGAAATG GCTGGGCACT
CGCACGCAAA AACCTGCGCT GATGATTTCC GGTTCCGCAG TCGGTTGGTA CGGCGACAGT
GGCGAGCGCG AAATCGACGA AACCTCGCTG CCTGCCAAGG AAGACTTTGC CAGCCAGCTG
TGCAATGCCT GGGAAGAAAC CGCGCAACGT GCCGAGGCGC TGGGTGTGCG GGTGGTGCTG
ATACGCACGG GGCTGGTGCT GTCCGATCGT GCCGGTTTTC TGCAGCGTCT GTTGCCCCCT
TTCAAATTCG GCATGGGCGG GCCGATCGGT AACGGCAGGC AGTGGATGCC GTGGGTTCAC
ATCCAGGATC AAATCGCCGC AATTGATTTT TTGTTAAATC TGAATGAAGC AAAGGGTCCT
TATAATGTTT GCGCGCCTTC ACCGGTGCGC AATCGTCAGT TTGCCAGGAC CCTGGCCGGC
ATTCTGCACC GACCGGCGTT CATGCCGATG CCTGCGCTGG CCCTGAAGGT ATTGCTGGGT
GAGCTTTCGG TATTGCTGCT CGGTGGTCAG CGTGCGCGGC CGGAGCGTTT GCAGGAAGCT
GGTTTTACAT TCAAGTACAC CGAACTCGAC ACCGCCCTGC AGGATTTGCT GGGTCGCCAC
TGA
|
|---|
| Protein sequence | MHILLTGGTG LIGRALCRFW SAQGHELTVW SRTPADVVEL CGPSVRGIAS LDELGTQPVD
AIINLAGAPI ADRPWTRKRR LLLWESRVGL TEQLLKWLGT RTQKPALMIS GSAVGWYGDS
GEREIDETSL PAKEDFASQL CNAWEETAQR AEALGVRVVL IRTGLVLSDR AGFLQRLLPP
FKFGMGGPIG NGRQWMPWVH IQDQIAAIDF LLNLNEAKGP YNVCAPSPVR NRQFARTLAG
ILHRPAFMPM PALALKVLLG ELSVLLLGGQ RARPERLQEA GFTFKYTELD TALQDLLGRH
|
|---|
| |