Gene Psyr_0959 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0959 
Symbol 
ID3366453 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1093438 
End bp1094226 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content63% 
IMG OID637651302 
ProductShort-chain dehydrogenase/reductase SDR 
Protein accessionYP_234053 
Protein GI66044212 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACTC CTGTTGCACG ACGCATCTGG TTGACCGGAG CAAGCAGCGG CATTGGCCTG 
GCGCTGGCCA AAGAACTGCT CAACGCCGGT CACCGGCTGG CGCTGACCGC CCGCACGCTT
GAGCCATTGC AGAACCTTGC GAACGTTTAT CCCACGCAAG TGCTGCTGGT GACCGGTGAC
ATCACCGACC CCGAGCAAGT CAAGGCGATT GCCGACGACA TCGCCCGGCA ATGGGGAGCC
CTGGACACGG CCATCTTCAA CGCCGGCACC TGCGAATACA TCGACGCCCG ACAGTTTGAA
GCGGCCATGG TCGAACGCGT GGTACGCACC AACCTGCTGG CCAGCAGTTA CTGCATCGAG
CACGCGTTGC CGCTGCTGCG CAAAGGTCAT CAGCCGCATC TGGTCGGCGT GGCCAGTGCG
GTGACCTACC TGGCCCTGCC CCGCGCCGAA GCCTACGGCG CGTCGAAAGC CGGCCTGCGT
TATCTGCTCG AAGCGCTGCG GCTGGACCTG GCCAGCGAAA ACATCGACGT GACAGTGGTC
AGCCCCGGGT TCGTCGACAC ACCGCTGACG CAGAAAAATG ATTTCCCCAT GCCCATGCGC
TGGCCTGTCG AGAGGGCAGC CAAACATATC GCCAGCAAAC TGGGGCGCAA CAAACGCCCA
CTGGATATCG CCTTTCCGGC GCTGTTCATC TTCAGCATGA GCTTGCTGGC CCTGCTCCCG
GCACGCGCCC GGCTGGCCCT CGGCAAACGC ATGGCGCGCA GCGAATCGTC GAATAAGGAC
GCGCAATGA
 
Protein sequence
MSTPVARRIW LTGASSGIGL ALAKELLNAG HRLALTARTL EPLQNLANVY PTQVLLVTGD 
ITDPEQVKAI ADDIARQWGA LDTAIFNAGT CEYIDARQFE AAMVERVVRT NLLASSYCIE
HALPLLRKGH QPHLVGVASA VTYLALPRAE AYGASKAGLR YLLEALRLDL ASENIDVTVV
SPGFVDTPLT QKNDFPMPMR WPVERAAKHI ASKLGRNKRP LDIAFPALFI FSMSLLALLP
ARARLALGKR MARSESSNKD AQ