Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0959 |
Symbol | |
ID | 3366453 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 1093438 |
End bp | 1094226 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637651302 |
Product | Short-chain dehydrogenase/reductase SDR |
Protein accession | YP_234053 |
Protein GI | 66044212 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACTC CTGTTGCACG ACGCATCTGG TTGACCGGAG CAAGCAGCGG CATTGGCCTG GCGCTGGCCA AAGAACTGCT CAACGCCGGT CACCGGCTGG CGCTGACCGC CCGCACGCTT GAGCCATTGC AGAACCTTGC GAACGTTTAT CCCACGCAAG TGCTGCTGGT GACCGGTGAC ATCACCGACC CCGAGCAAGT CAAGGCGATT GCCGACGACA TCGCCCGGCA ATGGGGAGCC CTGGACACGG CCATCTTCAA CGCCGGCACC TGCGAATACA TCGACGCCCG ACAGTTTGAA GCGGCCATGG TCGAACGCGT GGTACGCACC AACCTGCTGG CCAGCAGTTA CTGCATCGAG CACGCGTTGC CGCTGCTGCG CAAAGGTCAT CAGCCGCATC TGGTCGGCGT GGCCAGTGCG GTGACCTACC TGGCCCTGCC CCGCGCCGAA GCCTACGGCG CGTCGAAAGC CGGCCTGCGT TATCTGCTCG AAGCGCTGCG GCTGGACCTG GCCAGCGAAA ACATCGACGT GACAGTGGTC AGCCCCGGGT TCGTCGACAC ACCGCTGACG CAGAAAAATG ATTTCCCCAT GCCCATGCGC TGGCCTGTCG AGAGGGCAGC CAAACATATC GCCAGCAAAC TGGGGCGCAA CAAACGCCCA CTGGATATCG CCTTTCCGGC GCTGTTCATC TTCAGCATGA GCTTGCTGGC CCTGCTCCCG GCACGCGCCC GGCTGGCCCT CGGCAAACGC ATGGCGCGCA GCGAATCGTC GAATAAGGAC GCGCAATGA
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Protein sequence | MSTPVARRIW LTGASSGIGL ALAKELLNAG HRLALTARTL EPLQNLANVY PTQVLLVTGD ITDPEQVKAI ADDIARQWGA LDTAIFNAGT CEYIDARQFE AAMVERVVRT NLLASSYCIE HALPLLRKGH QPHLVGVASA VTYLALPRAE AYGASKAGLR YLLEALRLDL ASENIDVTVV SPGFVDTPLT QKNDFPMPMR WPVERAAKHI ASKLGRNKRP LDIAFPALFI FSMSLLALLP ARARLALGKR MARSESSNKD AQ
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