| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_0945 |
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| Symbol | ipk |
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| ID | 3366439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 1080200 |
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| End bp | 1081048 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637651288 |
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| Product | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase |
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| Protein accession | YP_234039 |
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| Protein GI | 66044198 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase |
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| TIGRFAM ID | [TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.666194 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCACGC CACAACTGGT TTTGCCTGCC CCGGCAAAAC TCAACCTCAT GCTGCACATT
CTCGGACGTC GTCCTGACGG TTATCACGAA CTGCAGACGC TGTTTCAGTT TCTCGATTAC
GGCGACGAAC TGGGTTTTAG CGTTCGCGAA GATGGCGAGA TTCACCTGCA GACCGACGTT
CCCGGTGTCC CGCATGACAG TAACCTGATC GTCAAAGCCG CCCGTGCCCT GCAACAACAG
TCCGGTTGTA CACTGGGCAT GGACATCTGG CTGGAAAAAC GCCTGCCCAT GGGTGGCGGT
ATCGGCGGCG GCAGCTCGGA TGCAGCGACC ACCCTGCTGG CCCTGAATCA TTTATGGCAG
CTCGGCTGGG ATGAGGATCG TCTGGCGCAA CTGGGGCTGA CACTGGGCGC CGATGTACCG
GTTTTCGTAC GTGGACATGC CGCTTTTGCT GAGGGCGTCG GCGAAATTCT CACCCCGGTG
GACCCGGAAG AACCCTGGTA TTTGGTGCTC GTCCCGCAAG TATCTGTAAG TACAGCAGAA
ATTTTTTCAG ATCCGTTGTT GACACGCGAC ACGCCGCCCA TTAAAGTGCG CCCCGTTCCC
AAGGGAAACA GTCGAAATGA CTGTAAGGCG GTTGTAGAGA GGCGTTACCC AGAAGTACGT
AACGCTTTGA ATTTGTTAGG TAAATTTACC GAAGCAAAAT TAACCGGAAC TGGAAGTTGT
GTGTTTGGGG CCTTCCCAAA CAAAGCTGAA GCTGATAAAG TCTCGGCCCT TCTTACAGAG
ACCCTTACGG GGTTCGTAGC GAAAGGAAGC AACATCTCGA TGTTGCATCG CAAGCTGCAA
ATTCTGTAG
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| Protein sequence | MSTPQLVLPA PAKLNLMLHI LGRRPDGYHE LQTLFQFLDY GDELGFSVRE DGEIHLQTDV
PGVPHDSNLI VKAARALQQQ SGCTLGMDIW LEKRLPMGGG IGGGSSDAAT TLLALNHLWQ
LGWDEDRLAQ LGLTLGADVP VFVRGHAAFA EGVGEILTPV DPEEPWYLVL VPQVSVSTAE
IFSDPLLTRD TPPIKVRPVP KGNSRNDCKA VVERRYPEVR NALNLLGKFT EAKLTGTGSC
VFGAFPNKAE ADKVSALLTE TLTGFVAKGS NISMLHRKLQ IL
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