Gene Psyr_0941 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0941 
Symbol 
ID3366434 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1076491 
End bp1077591 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content60% 
IMG OID637651283 
ProductGTP-dependent nucleic acid-binding protein EngD 
Protein accessionYP_234035 
Protein GI66044194 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0012] Predicted GTPase, probable translation factor 
TIGRFAM ID[TIGR00092] GTP-binding protein YchF 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.510815 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGATTCA ATTGCGGCAT CGTCGGCCTG CCTAACGTCG GCAAGTCCAC CCTGTTCAAC 
GCCCTGACCA AATCTGGTAT CGCGGCCGAG AACTTCCCCT TCTGCACCAT CGAGCCGAAC
AGCGGTATCG TGCCGATGCC CGACCCGCGT CTGGCGGCCC TGGCTGCCAT CGTCAACCCG
AAACGCATCC TGCCGACCAC CATGGAGTTC GTCGACATCG CCGGCCTCGT GGCAGGCGCT
TCGAAGGGCG AAGGCCTGGG CAACAAGTTT CTCGCCAACA TCCGCGAGAC CGATGCCATC
GCCCACGTGG TGCGCTGCTT TGAAGACGAG AACGTGATTC ACGTTTCCAA CAGCGTCGAC
CCCAAGCGCG ACATCGAGAT CATCGATCTG GAACTGATCT TCGCCGACCT CGACAGCTGC
GAGAAGCAAC TGCAAAAGGT CACCCGCAAC GCCAAGGGCG GCGACAAGGA CGCAGTGGTC
CAGAAAGGCC TGCTGGAACA GTTGATTGCA CACTTCAGCG AAGGCAAGCC TGCACGCAGC
CTGATGAAGA GCATGAGCAA CGACGAGAAA GCCACCATCC GTGGCTTCCA CCTGCTGACC
ACCAAGCCGG TCATGTACAT CGCCAACGTC GCCGAAGACG GCTTCGAGAA CAACCCGCTG
CTGGACGTGG TCCGCGCCAT CGCCGAAGAA GAAGGCGCAA TGCTGGTGCC GGTCTGCAAC
AAGATCGAAG CCGAAATCGC CGAGCTTGAT GACGGCGAAG AGAAAGACAT GTTCCTCGAA
GCCCTGGGCC TCGAAGAACC CGGCCTGAAC CGCGTGATCC GCGCTGGCTA CGAAATGCTC
CACCTGCAGA CCTACTTCAC CGCTGGCGTC GAAGAAGTCC GCGCCTGGAC CGTCCGCGTC
GGTGCCACCG CACCACAAGC CGCAGGCGTG ATCCACACCG ACTTCGAAAA AGGCTTCATC
CGCGCCGAAG TGGTGGCATA TGACGACTTC ATCCAGTTCA AGGGTGAGTC AGGTGCCAAG
GAAGCCGGCA AGTGGCGTCT GGAAGGCAAG GAATACATCG TCAAGGACGG TGATGTGATG
CATTTCCGGT TTAACGTCTG A
 
Protein sequence
MGFNCGIVGL PNVGKSTLFN ALTKSGIAAE NFPFCTIEPN SGIVPMPDPR LAALAAIVNP 
KRILPTTMEF VDIAGLVAGA SKGEGLGNKF LANIRETDAI AHVVRCFEDE NVIHVSNSVD
PKRDIEIIDL ELIFADLDSC EKQLQKVTRN AKGGDKDAVV QKGLLEQLIA HFSEGKPARS
LMKSMSNDEK ATIRGFHLLT TKPVMYIANV AEDGFENNPL LDVVRAIAEE EGAMLVPVCN
KIEAEIAELD DGEEKDMFLE ALGLEEPGLN RVIRAGYEML HLQTYFTAGV EEVRAWTVRV
GATAPQAAGV IHTDFEKGFI RAEVVAYDDF IQFKGESGAK EAGKWRLEGK EYIVKDGDVM
HFRFNV