| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_0888 |
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| Symbol | |
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| ID | 3366380 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 1010113 |
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| End bp | 1011369 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637651231 |
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| Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
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| Protein accession | YP_233984 |
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| Protein GI | 66044143 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase |
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| TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.994962 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACCTC AAGCCACCCT CACTGTTTTG CCTGTCGAGC GCCCGTTGGT CGGGCGTGTC
AGCCCGCCGG GCTCCAAGTC GATCACCAAC CGTGCATTGT TGCTGGCCGG GCTGGCCAAA
GGCACCAGCC GCCTGACCGG CGCGCTGAAG AGTGATGACA CGCGCGTGAT GTCCGAAGCC
TTGCGTCTGA TGGGCGTGCA GGTCGACGAG CCGGATGACA GCACCTTCGT GGTCACCAGC
AGCGGGCACT GGCAGGCGCC GCAACAGGCG CTGTTCCTCG GCAATGCCGG GACTGCGACA
CGCTTTCTGA CCGCGGCACT GGCCAACTTC GAAGGCGACT TCGTGGTGGA TGGCGACGAA
TACATGCGCA AGCGCCCGAT CGGCCCGTTG GTCGATGCCT TGCAGCGCAT GGGCGTGGAG
GTCAGCGCAC CCAGTGGTTG CCCGCCGGTG GCCATCAAGG GCAAGGGCGG TCTTGAGGCC
GGTCGTATCG AAATCGACGG CAATCTGTCC AGCCAGTATG TGTCGGCACT GCTGATGGCC
GGTGCCTGTG GCAAGGGGCC TGTGGAAGTT GCCCTGACAG GCAGCGAGAT CGGCGCGCGT
GGTTACCTCG ACCTCACGCT GGCGGCCATG CGGGCGTTCG GTGCCGAGGT TCAGGCCATC
GGCGACGCCG CCTGGAAAGT CTCGGCTACC GGTTATCGCG CTACGGATTT CCACATCGAA
CCGGATGCCT CGGCGGCCAC CTACCTTTGG GCTGCGCAGG CCCTGACCGA GGGCGCTATC
GACCTGGGCG TGGCCAGCAA CGCGTTCACT CAGCCTGATG CACTGGCCAG TCAGATCATC
GCCAGCTTCC CGAACATGCC GGCCGTGATC GACGGCTCGC AGATGCAGGA CGCGATTCCC
ACGCTGGCCG TACTGGCCGC GTTCAATCGT CAACCGGTGC GCTTTGTCGG CATCGCCAAC
CTGCGGGTCA AGGAGTGCGA CCGCATCTCG GCACTGTCCA ACGGCCTGTG CGCCATCGCA
CCCGGCCTGG CGGTCGAAGA GGGTGACGAT CTGATCGTTA CCGCCAACCC GACGCTGGCA
GGCACTACGG TCGATGCCTT GATCGATACC CACTCCGACC ATCGGATCGC CATGTGCTTT
GCACTGGCGG GCCTGAAGAT TGCCGGCATC CGCATTCTCG ACCCTGATTG CGTCGCCAAG
ACCTACCCGG GGTACTGGGA TGCGCTGGCT TCTCTGGGTG TGAGTGTTCA GCGCTGA
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| Protein sequence | MRPQATLTVL PVERPLVGRV SPPGSKSITN RALLLAGLAK GTSRLTGALK SDDTRVMSEA
LRLMGVQVDE PDDSTFVVTS SGHWQAPQQA LFLGNAGTAT RFLTAALANF EGDFVVDGDE
YMRKRPIGPL VDALQRMGVE VSAPSGCPPV AIKGKGGLEA GRIEIDGNLS SQYVSALLMA
GACGKGPVEV ALTGSEIGAR GYLDLTLAAM RAFGAEVQAI GDAAWKVSAT GYRATDFHIE
PDASAATYLW AAQALTEGAI DLGVASNAFT QPDALASQII ASFPNMPAVI DGSQMQDAIP
TLAVLAAFNR QPVRFVGIAN LRVKECDRIS ALSNGLCAIA PGLAVEEGDD LIVTANPTLA
GTTVDALIDT HSDHRIAMCF ALAGLKIAGI RILDPDCVAK TYPGYWDALA SLGVSVQR
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