Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0834 |
Symbol | |
ID | 3366321 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 945989 |
End bp | 946876 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637651172 |
Product | glutamyl-Q tRNA(Asp) synthetase |
Protein accession | YP_233930 |
Protein GI | 66044089 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0008] Glutamyl- and glutaminyl-tRNA synthetases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00133315 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAAAAC CGGCCTGTAT CGGGCGCTTT GCGCCGACTC CCAGTGGTTA CCTGCATTTT GGCTCGCTGG TCGCAGCCCT CGCCTCCTAT CTCGATGCGC GCGCGGCAGA CGGTCAGTGG CTGTTGCGCA TGGAGGATCT CGACCCGCCG CGTGAAGTAG CCGGCGCGCA GGCGGGGATT CTCGAGACAC TCGAGCGCTA CGGTTTTGAA TGGGACGGCC AGATGGTGCG GCAAAGCGAG CGACATGACG CCTACGCCGA GATCCTCCAG CGCTGGTTCA ATCATGGCCT GGCCTACGCC TGCACCTGCT CGCGCAAACA GCTCGAAGGC TTTCAGGGTA TTTATCCGGG TTTCTGCCGC AATGCCGGAC ATTCGCCAGA CAACGCGGCG ATCCGCATTC GCGTACCGGA GCTGGAATAT CGTTTCGACG ACCGGGTTCA GGGCACCTTC AAAATGCACC TGGGCCGCGA AAGCGGTGAC TTTGTGATCC GCAGGCGCGA TGGGCTGTAT GCCTATCAAC TGGCCGTGGT CATTGACGAC GCCTGGCAAG GCGTCACCGA TATCGTCCGC GGCGCCGACC TGCTCGACTC GACCCCCCGC CAGCTGTACC TGCAGGAACT GCTGGGCCTG CCCCAACCGC GCTACCTGCA TGTACCGTTG ATCACCCAGC CGGATGGCCA CAAGCTGGGC AAGTCCTATC GCTCCCCACC GCTGCCGGCC GATCAGGCGA CGCCGCTGCT GCTGCGGGCC TTGCGCGCAT TGGGGCAACC GCTCGATACG CACATGGCCG ACGGCACTGC ACAGGAAGTG CTTGCCTGGG GCATCCGTCA CTGGAACGCT GACCTGATAC CCCGACTGCG CAATATTGAA GAAGCCCGGA TAGACTGA
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Protein sequence | MKKPACIGRF APTPSGYLHF GSLVAALASY LDARAADGQW LLRMEDLDPP REVAGAQAGI LETLERYGFE WDGQMVRQSE RHDAYAEILQ RWFNHGLAYA CTCSRKQLEG FQGIYPGFCR NAGHSPDNAA IRIRVPELEY RFDDRVQGTF KMHLGRESGD FVIRRRDGLY AYQLAVVIDD AWQGVTDIVR GADLLDSTPR QLYLQELLGL PQPRYLHVPL ITQPDGHKLG KSYRSPPLPA DQATPLLLRA LRALGQPLDT HMADGTAQEV LAWGIRHWNA DLIPRLRNIE EARID
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