Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0832 |
Symbol | |
ID | 3366319 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 942776 |
End bp | 945730 |
Gene Length | 2955 bp |
Protein Length | 984 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637651170 |
Product | PAS |
Protein accession | YP_233928 |
Protein GI | 66044087 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only [T] Signal transduction mechanisms |
COG ID | [COG0591] Na+/proline symporter [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00253594 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCGATGA GCTTTAGTCT GACGCAGATG CTGCTGGTCA GCGCCGCCTA CCTGCTGGTG CTGTTCGGTG TAGCCTGGGT CAGCGAACAC GGCCTGATTC CGCGCTGGAT CATTCGTCAT CCGCTGACTT ACACCCTGTC ACTGGGCGTC TACGCCAGCG CCTGGGCGTT TTATGGCACG GTCGGTCTGG CCTATCAGTA TGGCTACGGC TTTCTGTCCA GTTATCTGGG GGTATCCGGG GCCTTCCTCC TCGCGCCGGT GCTGCTTTAC CCGATCCTCA GAATTACCCG CACCTACCAG CTGTCATCAC TGGCCGACCT GTTCGCCTTC CGTTTTCGCA GCACCTGGGC CGGTGCACTG ACCACCGTAT TCATGCTGAT CGGCGTGCTG CCGCTGCTGG CCTTGCAGAT TCAGGCGGTC GCCGACTCCA TCGGCATTCT GACCCGCGAG CCCGTGCAGG ACAGGGTCGC CGTGGCGTTC TGCGCACTGA TCACCCTGTT CACGATTTTC TTCGGCTCAC GGCACATCGC GACCCGCGAG AAACACGAGG GCCTGGTGTT CGCCATCGCC TTTGAATCGC TGATCAAGCT GATTGCCCTG GGCGGCGTCG GGCTGTATGC CTTGTATGGC GTGTTCGACG GACCGCAACA ACTGGAACTG TGGCTGCTGC AGAACCAGAC CGCCCTCGCC TCGCTGCACA CGCCTTTGCA GGAAGGCCCG TGGCGCACGC TGCTGCTGGT GTTCTTCGCC TCGGCCATCG TCATGCCGCA CATGTATCAC ATGACCTTTA CCGAAAACCT CAATCCGCGC TCGCTGGTCA GCGCCAGTTG GGGTCTGCCG CTGTTTCTGC TGTTGATCAG CCTGGCAGTG CCGTTGATCC TCTGGGCCGG GCTGAAACTT GGCGCCACCA CCAGCCCGGA ATACTTCACG CTCGGCATCG GTATCGCCGC CAACAGCAAG TCCCTGGCCC TGCTCGCTTA CATCGGCGGG CTGTCGGCGG CCAGCGGGCT GATCATCGTC ACCACGCTGG CGTTGTCCGG CATGGCACTC AATCACCTGG TGCTGCCGCT GTATCAGCCA CCCGCCGAGG GCAATATCTA CCGCTGGCTG AAGTGGACAC GACGCGGACT GATCGTGGCG ATCATCGCGC TGGGTTACGG CTTCTACCTG ATGCTCGGCG CGCAGCAGGA TCTGGCCAAC CTGGGCATCG TCGCCTTCGT TGCAACCCTG CAATTTCTGC CGGGCGTGCT GTCGGTGCTG TACTGGCCGA CCGCCAACCG ACGCGGCTTC ATCGCCGGGC TGCTGGCCGG CATTTCAGTC TGGGCGGTCA GCATGCTGTT GCCGCTGATC GGCAACCTGC AGGGCTTCTA TATTCCCTGG CTGAACATGA TCTATGTGCT GGACGACACC AGTTGGCACA TGGCAGCCAT CGCCTCGCTC GCCGCCAACG TCTTGCTGTT CACCCTGATC TCGCTGTTCA CCAATGCCAG CCCTGAAGAA GCCGGGGCCG CCGAGGCCTG CGCAGTCGAC AACGTGCGTC GCCCACAGCG CCGTGAACTG CACGCCGTGT CGCCGCAGGA GTTCGCCACC CAACTGGCCA AGCCGCTGGG CGCGAAAGCC GCGCAGAAGG AGGTCGAGCA AGCGCTGCGC GATCTCTACC TGCCCTTCGA CGAGCGCCGC CCTTATGCCC TGCGCCGCCT GCGCGACCGC ATCGAGGCCA ACCTGTCCGG GCTGATGGGG CCGAGCGTTG CCCAGGACAT GGTGGAAACC TTTCTGCCGT ACAAATCAGG CAGCGAAAAA TACGTCACCG AAGACATACA TTTCATTGAA AGCCGGCTTG AGGACTACCA CTCGCGCCTC ACCGGCCTTG CCGCCGAACT CGATGCCCTG CGTCGCTACC ACCGCCAGAC CCTACAGGAG CTGCCGATGG GCGTCTGCTC GCTGGCCGAA GATCAGGAGA TCCTGATGTG GAACAGGGCC ATGGAAGAAT TGACCGGCAT CGTCGCGCAG CGTGTGGTCG GCTCGCGACT GGAAACCATT GCCGAGCCGT GGAAGAGCCT GCTGACCGGT TTTACCAGCC TGCCCGATGA GCATTTGCAC AAGCAGAAGC TCGGTCTGGA CGGCCAGACA CGCTGGCTCA ATCTGCACAA GGCAGCCATC AACGAGCCTC TGGCGCCGGG CAACAGCGGC CTGGTGGTGC TGGTCGAGGA CCTGACCGAC ACGCAGATGC TCGAAGACAA GCTGGTGCAC TCGGAACGCC TGGCAAGCAT CGGCCGCCTG GCCGCCGGTG TGGCGCACGA AATCGGTAAT CCGATCACCG GCATTGCCTG CCTCGCCCAG AACCTGCGCG AAGAACGTGA AGAAGACGGC GAGCTCAAGG AAATCAGCAG CCAGATCCTC GAACAGACCA AACGCGTATC GCGCATCGTC CAGTCATTGA TGAGCTTTGC TCACGCGGGC GCTCATCAGC ATAGCGACGA AGCCGTTTGT CTGGCCGTGG TGGCTCAGGA TGCTATTGGT CTGCTGGCAC TGAACCGGCG CAATTTCGAA GTACACTTCT ACAACCTGTG TAACCCCGAG CACTGGGCGG TTGGCGATCC GCAACGGCTG GCGCAGGTGT TGATCAACCT GCTCTCCAAC GCCCGCGACG CCTCCCCGGC AGGCAGCGCA GTCAGGGTCA GAAGCGAAGT ATCCGAGCAC ACTGTGGACT TGATCGTCGA AGACGAAGGC AGTGGGATTT CAAAGGCAAT CATGGACCGA TTGTTCGAGC CGTTCTTCAC CACCAAGGAT CCTGGCGAGG GAACCGGACT TGGCCTGGCG CTGGTCTATT CCATCGTTGA AGAGCATTAT GGACAAATCA CCATCGACAG CCCGGCCGAT CCCGAGCAGC AGCGTGGAAC CCGAATCAGG GTGACCTTGC CACGCCATGT CGACGCGACG TCCACCGCGA ACTGA
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Protein sequence | MPMSFSLTQM LLVSAAYLLV LFGVAWVSEH GLIPRWIIRH PLTYTLSLGV YASAWAFYGT VGLAYQYGYG FLSSYLGVSG AFLLAPVLLY PILRITRTYQ LSSLADLFAF RFRSTWAGAL TTVFMLIGVL PLLALQIQAV ADSIGILTRE PVQDRVAVAF CALITLFTIF FGSRHIATRE KHEGLVFAIA FESLIKLIAL GGVGLYALYG VFDGPQQLEL WLLQNQTALA SLHTPLQEGP WRTLLLVFFA SAIVMPHMYH MTFTENLNPR SLVSASWGLP LFLLLISLAV PLILWAGLKL GATTSPEYFT LGIGIAANSK SLALLAYIGG LSAASGLIIV TTLALSGMAL NHLVLPLYQP PAEGNIYRWL KWTRRGLIVA IIALGYGFYL MLGAQQDLAN LGIVAFVATL QFLPGVLSVL YWPTANRRGF IAGLLAGISV WAVSMLLPLI GNLQGFYIPW LNMIYVLDDT SWHMAAIASL AANVLLFTLI SLFTNASPEE AGAAEACAVD NVRRPQRREL HAVSPQEFAT QLAKPLGAKA AQKEVEQALR DLYLPFDERR PYALRRLRDR IEANLSGLMG PSVAQDMVET FLPYKSGSEK YVTEDIHFIE SRLEDYHSRL TGLAAELDAL RRYHRQTLQE LPMGVCSLAE DQEILMWNRA MEELTGIVAQ RVVGSRLETI AEPWKSLLTG FTSLPDEHLH KQKLGLDGQT RWLNLHKAAI NEPLAPGNSG LVVLVEDLTD TQMLEDKLVH SERLASIGRL AAGVAHEIGN PITGIACLAQ NLREEREEDG ELKEISSQIL EQTKRVSRIV QSLMSFAHAG AHQHSDEAVC LAVVAQDAIG LLALNRRNFE VHFYNLCNPE HWAVGDPQRL AQVLINLLSN ARDASPAGSA VRVRSEVSEH TVDLIVEDEG SGISKAIMDR LFEPFFTTKD PGEGTGLGLA LVYSIVEEHY GQITIDSPAD PEQQRGTRIR VTLPRHVDAT STAN
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