| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_0798 |
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| Symbol | |
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| ID | 3366285 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 903509 |
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| End bp | 905203 |
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| Gene Length | 1695 bp |
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| Protein Length | 564 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637651136 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_233894 |
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| Protein GI | 66044053 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | [TIGR02538] type IV-A pilus assembly ATPase PilB |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGATG CTGTCCTCAC TGGCTTGGCC AAGCAATTGG TCCTCGCCGA GCTACTTACT
GAACCTGTTG CGCAGCAAGC GTATCAGCAG GCGCGCCGCG ACAAGATTTC GTTGGTGAGC
TATCTGGTTC AGCACAAACT GGTCAAAAGC CTGACGCTGG CAGAACTGGC CTCCGATCAG
TTCGGCGTGC CTTTCATGGA CCTCGCCAGC CTGGACAAGG AAAGCCTGCC TAAAGGCTTG
GTCAGTGAAA AGCTGGTTCG ACAACATCAC GCACTGCCGT TGTGGCGACG CGGTAACAAA
CTGTTTATCG GGATTTCGGA CCCGACCAAT CATCAGGCAG TGACTGAGAT CCAGTTCAGC
ACTGGCCTGA ACACCGAAGC GATTCTGGTT GAAGATGACA AGCTGACTGT TGCGATAGAC
CGGTTTTTTG ACAGCGACAG CGGGCTGGGC AATCTGGAAG ATGTCGATCT GGGCCTGGAT
ATCGAACCGG CCGATGGCAA GGAAACCACG CTAGCTACAC AGAATGACGC TGACGATGCC
CCGGTGGTGC GCTTCGTCAA CAAGATGCTT ATGGATGCCA TCCGACTAGG ATCATCCGAC
TTGCACTTCG AGCCCTATGA AAAGATCTTC CGCGTACGTT TGCGTACCGA TGGCATCCTG
CACGAAGTCG CCAGACCGCC GATCCATTTG GCAAACCGTA TTGCTGCGCG TCTGAAGGTC
ATGGCCAGCC TCGATATTTC GGAACGACGC AAACCGCAGG ACGGAAGGGT CAAGTTGCGG
GTGTCCAAAA CAAAGGCCAT CGATTTTCGT ATGAATACCC TGCCCACATT GTGGGGCGAG
AAGATCGTAA TGCGGATTCT CGACCCAACC AGTGCGCAGA TGGGTATCGA TGCGCTGGGC
TATGAGCCTG ATCAAAAGGC ACTGTACTTA GAGGCGCTTA AACTGCCGCA AGGGATGATT
CTTGTGACTG GCCCTACAGG TTCAGGCAAG ACTGTATCTC TCTATACCGG CCTGAACATT
CTAAACACTG TGGACATTAA CATTTCCACA GCTGAAGACC CGGTGGAGAT CAACCTGGAA
GGCATCAATC AGGTCAACGT CAACCCGCGC CAAGGACTGG ACTTTTCCCA AGCCTTGCGC
GCGTTTTTGC GTCAAGATCC CGACGTGATT ATGGTCGGCG AAATACGAGA TCTGGAAACT
GCCGAAATCG CCATCAAAGC CTCGCAGACC GGCCATATGG TGCTTTCCAC ATTGCACACC
AACAGCGCTG CGGAAACGCT GACCCGCCTG CATCACATGG GCGTTGCAGC ATTCAACATT
GCTACAGCGA TCAACCTGAT TATTGCGCAG CGACTGGCAC GTAAGCTGTG TAGCCACTGC
AAAAAAGAAC TGGATATTCC TCGCGAGACA CTGATTCAGG AAGGCTTTCC AGAAGCCAAA
ATCGGCACTT TTAAGGTATA CGGCCCGGTG GGCTGTGAGC ACTGCAACGG GGGTTACCGA
GGCAGGGTGG GCATTTACGA AGTGGTCAAG AAAACACCGG AACTGGAACG CATCATCATG
GAAGAAGGCA ACTCCCTGGA GATCTCCAGA CAGATGCGCA AGGACGGTTT CAATGACCTG
CGAACCTCAG GCCTGTCAAA AGCTATGCAG GGCATTACCA GCCTTGAAGA AGTCAACCGT
GTGACCAAGG ATTAA
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| Protein sequence | MTDAVLTGLA KQLVLAELLT EPVAQQAYQQ ARRDKISLVS YLVQHKLVKS LTLAELASDQ
FGVPFMDLAS LDKESLPKGL VSEKLVRQHH ALPLWRRGNK LFIGISDPTN HQAVTEIQFS
TGLNTEAILV EDDKLTVAID RFFDSDSGLG NLEDVDLGLD IEPADGKETT LATQNDADDA
PVVRFVNKML MDAIRLGSSD LHFEPYEKIF RVRLRTDGIL HEVARPPIHL ANRIAARLKV
MASLDISERR KPQDGRVKLR VSKTKAIDFR MNTLPTLWGE KIVMRILDPT SAQMGIDALG
YEPDQKALYL EALKLPQGMI LVTGPTGSGK TVSLYTGLNI LNTVDINIST AEDPVEINLE
GINQVNVNPR QGLDFSQALR AFLRQDPDVI MVGEIRDLET AEIAIKASQT GHMVLSTLHT
NSAAETLTRL HHMGVAAFNI ATAINLIIAQ RLARKLCSHC KKELDIPRET LIQEGFPEAK
IGTFKVYGPV GCEHCNGGYR GRVGIYEVVK KTPELERIIM EEGNSLEISR QMRKDGFNDL
RTSGLSKAMQ GITSLEEVNR VTKD
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