Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0797 |
Symbol | |
ID | 3366284 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 902289 |
End bp | 903506 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637651135 |
Product | type II secretion system protein |
Protein accession | YP_233893 |
Protein GI | 66044052 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1459] Type II secretory pathway, component PulF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAGCA AGGCAGCAAA AGTCATCGTT TACACTTGGG AAGGTGTTGA CAAGAAAGGT ACTAAAACCA GTGGGGAACT GAGTGGCCAT AACTTGGCCC TTGTAAAAGC CCAGCTGCGC AAGCAAGGCA TCAACCCAAC CAAGGTACGC AAAAAATCAG TTTCGATCTT TGGCAAGGGC AAGAAGATCA AACCGCTGGA CATTGCGTTC TTTTCTCGCC AGATGGCTAC GATGATGAAG GCCGGTGTGC CATTGCTGCA ATCGTTTGAC ATCATTAGCG AAGGCGCTGA GAACCCTAAC ATGCGCGCAT TGGTTGGTTC GCTAAAGCAG GAAGTTTCGG CAGGTAATAG TTTTGCGACG GCTCTGCGAC AAAAACCCGA ATATTTCGAT GATCTGTTTT GTAACCTAGT AGATGCCGGC GAGCAAGCTG GCGCACTTGA AAGCCTGCTG GACCGTGTAG CGAGCTATAA AGAGAAGACC GAAAAGCTAA AAGCTAAAAT CAAGAAAGCC ATGACATACC CGATTGCCGT ATTGATTGTT GCATTGATTG TATCCGGCAT TCTGCTGATC AAAGTGGTGC CGCAGTTCCA GTCAGTCTTC GCTAGCTTTG GCGCTCAGTT ACCGACGTTT ACCCTGATGG TTATTGGTCT ATCGGACGTC GTACAAAAAT GGTGGCTGGC CATTGTCGGG CTATTTTTCG TCAGCTTTTT TATTTTTAAA CGTGCTTACA AACAGTCTCA AAAGTTTCGA GATAGCCTCG ACCGACTTCT GCTGAAAGTG CCCATCATTG GGCCGTTAAT TTTCAAATCT TCGGTAGCAC GCTACGCGCG CACGCTTGCA ACAACGTTTG CCGCTGGCGT CCCGCTTGTG GAGGCTTTGG ACTCAGTCGC CGGAGCGACT GGCAATGTAG TATTTAAAAA TGCAGTCATC AAGGTAAAAC AGGACGTCTC CACGGGTATG CAACTGAATT TCTCGATGCG TTCAACAGGA GTGTTTCCGA GCTTGGCGAT TCAGATGACA GCCATTGGCG AAGAGTCCGG CGCGCTGGAC ACCATGCTCG ACAAGGTAGC TACCTATTAC GAGGACGAAG TCGATAACAT GGTCGACAAT CTGACCAGCC TTATGGAACC GATGATCATG GCCTTTTTGG GCGTGATAGT TGGCGGGCTG GTAATCGCGA TGTATCTACC TATCTTCCAA CTCGGAAACG TCGTCTGA
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Protein sequence | MASKAAKVIV YTWEGVDKKG TKTSGELSGH NLALVKAQLR KQGINPTKVR KKSVSIFGKG KKIKPLDIAF FSRQMATMMK AGVPLLQSFD IISEGAENPN MRALVGSLKQ EVSAGNSFAT ALRQKPEYFD DLFCNLVDAG EQAGALESLL DRVASYKEKT EKLKAKIKKA MTYPIAVLIV ALIVSGILLI KVVPQFQSVF ASFGAQLPTF TLMVIGLSDV VQKWWLAIVG LFFVSFFIFK RAYKQSQKFR DSLDRLLLKV PIIGPLIFKS SVARYARTLA TTFAAGVPLV EALDSVAGAT GNVVFKNAVI KVKQDVSTGM QLNFSMRSTG VFPSLAIQMT AIGEESGALD TMLDKVATYY EDEVDNMVDN LTSLMEPMIM AFLGVIVGGL VIAMYLPIFQ LGNVV
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