Gene Psyr_0723 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0723 
Symbol 
ID3366206 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp827353 
End bp828945 
Gene Length1593 bp 
Protein Length530 aa 
Translation table11 
GC content60% 
IMG OID637651068 
Producttype IV pilus sensor protein PilS 
Protein accessionYP_233829 
Protein GI66043988 
COG category[T] Signal transduction mechanisms 
COG ID[COG2205] Osmosensitive K+ channel histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGCTG ACTCACCGTC CCTTGTCAGC CCGCAGGCAC AGCGGATTCT ACGGCTGTAC 
CACCTCTACC GACTGACCAT CGGCGTTGTA CTGGTTCTGT TGATTTCCAG CAGCCTGGAA
ACCGAGCTGC TGCAACTGGC CAACCCGAAC CTGTTCCGCT CGGGCTGCTG GTTGTATCTG
GTGTTCAACA TTCTGGTCGT CGTGCTGCTG GAACGCCCCA GCCGTCAGGC ACAGTTTTTC
GGCCTGGCGA TGACCGACGC GATCATGCTC TCCGCGCTAT TCTACGCAGC CGGCGGGCCT
TCCAGCGGTA TCGGCAACCT GTTGATTGCC TCGGTGGCGA TCAGCAACGT GCTGCTGCGC
GGCCGTATCG GCTTGTTGAT CGCTGCGGTT TCGGCCATCG GCATCATCTA CTTGACGTTC
TACATCAGCT TCGGCACACC CTCGGTTTCC AACGACTACG TGCAGGCTGG CTCGCTGGGC
GCCTTGTGCT TCGCCGCCGC CCTGCTGGTG CAGGCGCTGA CAGCGCGCAT GCAGGTCAGC
GAGGTACTGG CCGAACAGCG CGCGGCGGAT GTCGACAGCC TCGAAGCACT CAACGCACTC
ATTCTGCAAC GCATGCGTAC CGGCATTCTG GTGCTGGATG CCAATCACCA GGTGCTGCTG
GCCAATCAGG GTGCCTTACA CCTGCTGGGT CAGGAGCAAC TGGTCGGCCA GATCATCGAC
ACCTGCTCGC CACAACTGGT CGAACGCCTG CGCCAGTGGC TCGTCAACCC GATCATGGTG
CCGCGCAGCA TCACCACCGC CCCCGTCGGG CTGGTGCTGC AACCGAGCTT TGCCACACTC
AACCGTGGCG ATCAGCGTCA GACGCTGGTT TTTCTCGAAG ACCTGTCGCA GATCGCCCAT
CAGGCGCAGC AGCTCAAGCT TGCCGCGCTG GGGCGCCTGA CCGCCGGGAT TGCCCATGAG
ATACGCAACC CGCTGGGCGC CGTCAGTCAT GCGGCGCAGT TGCTTAATGA ATCGGAAGAG
CTCAGTGCAG CGGATCGACG CTTGGGGCAG ATCATTCATG AGCAGTCGGG ACGCATTGAT
AGGGTCATCG AAAATGTCCT GCAGTTGTCA CGCAGACGCG AAGCGCAACC CGAACTGCTC
GATCTGAAAA CCTGGCTGGA ACACTTTGTC GCTGAATTTC GCAGTTCCGC TGCGCCCAAT
CAGAAGATTC ATGTCGACAT CAGCCCTGGC ACGCTGACAA CCCGCATGGA TTCCGGACAA
CTGACGCAAA TCATGACCAA CCTGGTGCAG AACGGCCTGC GCTACAGCGG CAAGAATCAT
CCGTCAGCGC AGGTCTGGCT GAAACTACAC AATGACCAGA AGAGCGACCT GCCCACACTG
GAAGTGCTGG ACGACGGGCC GGGGGTCAGC GAGCAACACC TGAGCAAAAT GTTCGAACCG
TTTTTCACCA CAGAAAGCAA AGGCACCGGC CTTGGTCTAT ATCTGTCACG TGAACTGTGT
GAAAGCAATC AGGCGCATCT GGAATACGCG CCCCGCCCCA CGGGTGGCAG TTGCCTGCGC
ATTACCTTCG CCCACCCGTT CAAGACGAGC TGA
 
Protein sequence
MTADSPSLVS PQAQRILRLY HLYRLTIGVV LVLLISSSLE TELLQLANPN LFRSGCWLYL 
VFNILVVVLL ERPSRQAQFF GLAMTDAIML SALFYAAGGP SSGIGNLLIA SVAISNVLLR
GRIGLLIAAV SAIGIIYLTF YISFGTPSVS NDYVQAGSLG ALCFAAALLV QALTARMQVS
EVLAEQRAAD VDSLEALNAL ILQRMRTGIL VLDANHQVLL ANQGALHLLG QEQLVGQIID
TCSPQLVERL RQWLVNPIMV PRSITTAPVG LVLQPSFATL NRGDQRQTLV FLEDLSQIAH
QAQQLKLAAL GRLTAGIAHE IRNPLGAVSH AAQLLNESEE LSAADRRLGQ IIHEQSGRID
RVIENVLQLS RRREAQPELL DLKTWLEHFV AEFRSSAAPN QKIHVDISPG TLTTRMDSGQ
LTQIMTNLVQ NGLRYSGKNH PSAQVWLKLH NDQKSDLPTL EVLDDGPGVS EQHLSKMFEP
FFTTESKGTG LGLYLSRELC ESNQAHLEYA PRPTGGSCLR ITFAHPFKTS