Gene Psyr_0710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0710 
SymbolileS 
ID3366193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp813520 
End bp816351 
Gene Length2832 bp 
Protein Length943 aa 
Translation table11 
GC content61% 
IMG OID637651055 
Productisoleucyl-tRNA synthetase 
Protein accessionYP_233816 
Protein GI66043975 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0060] Isoleucyl-tRNA synthetase 
TIGRFAM ID[TIGR00392] isoleucyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0257753 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGACT ATAAAGCCAC GCTAAACCTT CCGGACACCG CCTTCCCTAT GAAGGCCGGC 
CTGCCCCAGC GCGAGCCGCA AACTCTGCAG CGCTGGGACA GCATTGGCCT GTACCAGAAG
CTGCGCGAGA TTGGCAAGGA TCGTCCCAAG TTCGTTCTGC ACGACGGTCC TCCGTACGCC
AACGGCAATA TTCACATCGG TCATGCGGTC AACAAGATTC TCAAGGACAT GATCCTGCGT
TCCAAGACCC TGGCGGGCTT CGATGCCCCG TATGTGCCGG GCTGGGACTG CCATGGTCTG
CCGATCGAAC ACAAGGTCGA AGTGACCCAC GGCAAGAACC TCTCCGCCGA CCGTACGCGT
GAGCTGTGCC GCGCCTATGC GTCCGAGCAG ATCGAAGGCC AGAAGTCCGA ATTCATCCGT
CTCGGCGTGC TGGGCGACTG GAGCAATCCG TACCTGACCA TGAACTTTGC CAACGAAGCC
GGGGAAATCC GCGCGCTGGC CGAGATGGTC AAGGGCGGTT TCGTCTTCAA GGGCCTCAAG
CCGGTCAACT GGTGTTTCGA TTGCGGTTCG GCACTGGCTG AAGCCGAAGT CGAGTATCAG
GACAAGAAGT CCTCGACCAT CGACGTCGCG TTCCCGATCG CCGACGAAGC GAAACTGGCA
GCCGCGTTCG GCGTGCCGTC GCTGGGCAAG CCTGCGTCCA TCGTGATCTG GACCACCACA
CCGTGGACCA TCCCCGCCAA CCAGGCGCTG AACGTCCACC CGGAATTCGA ATACGCGCTG
GTCGATGTCG GCGACAAACT TCTGGTACTG GCCGCCGAAC TGGTCGAAAG CTGTCTGGCC
CGTTACAAGC TGGAAGGCAC CGTCATCGCG ACCACCACCG GTCAGGCGCT TGAGCTGATC
AACTTCCGCC ATCCGTTCTA CGACCGCCTG TCGCCAGTCT ATCTGGCTGA CTACGTCGAG
CTGGGTGCGG GCACGGGTAT CGTGCACTGC TCGCCTGCCT ATGGCGTAGA CGACTTCACT
ATCTGCAAAC AGTATGGCCT GAGCAACGAC GACATCATCA GCCCGGTGCA GAGCAACGGT
GTGTATGTCG AGTCGCTGGA GTTCTTCGGT GGCCAGTTCA TCTTCAAGGC CAACCAGAAC
ATCATCGACA AGCTGGTCGA AGTCGGCAGC CTGATGGACA CCGAAACCAT CAGCCACAGC
TACATGCACT GCTGGCGCCA CAAGTCGCCC TTGATCTACC GCGCCACCGC GCAGTGGTTC
GTCGGCATGG ACAAGCAGCC TGAAAGCGGC GAGACCCTGC GCAAGCGTGC GGTCAAGGCC
ATCGAAGACA CTGAATTCGT TCCGGCATGG GGGCAGGCGC GCCTGCACTC GATGATCGCC
AACCGTCCTG ACTGGTGCAT CTCGCGTCAG CGCAACTGGG GCGTGCCGAT TCCGTTCTTC
CTGCACAAGG AAAGCGGCGA CCTGCACCCA CGTACCGTCG AGCTGATGGA AGAAGTGGCG
CAGCGTGTCG AGAAAGAAGG CATCGAGGCC TGGTTCAAGC TCGATGCCAG CGAGTTGCTC
GGTGACGAAG CCGGCAAGTA CGACAAGATC TCCGACACCC TGGACGTCTG GTTCGACTCG
GGCACCACGC ACTGGCATGT GCTGCGCGGT TCGCACCCGA TGGGCCACGA AAGCGGTCCG
CGTGCCGACC TGTACCTGGA AGGCTCGGAC CAGCATCGCG GCTGGTTCCA CTCCTCACTG
CTGACCGGCT GCATGCTGGA CGATCACGCA CCGTATCGCG AGCTGCTGAC CCACGGGTTC
GTGGTCGACG AGAACGGCCG CAAGATGTCC AAATCGCTGA ACAACGTGGT AGCGCCACAG
AAGGTCAACG ATTCGCTGGG TGCCGACATC ATGCGTCTGT GGGTATCGGC GACCGATTAT
TCCGGCGAGA TGGCGGTTTC CGACCAGATC CTGCAGCGCA GCGCTGACGC TTATCGTCGT
ATCCGCAACA CTGCACGCTT CCTGCTCTCC AACCTGACGG GCTTCAACCC GGCGACCGAC
ATCCTGCCTG CCGAGGAAAT GCTCGCGCTG GACCGTTGGG CCGTGGATCG CACGCTGCTG
CTGCAACGCG AGCTGCTAGA GCATTACGGC GAATACCGCT TCTGGAACGT CTACTCGAAG
ATCCACAACT TCTGCGTGCA GGAACTGGGT GGTTTCTACC TCGACATCAT CAAGGATCGT
CAGTACACCA CGGCGGCCAA CAGCACTGCG CGTCGTTCGT GCCAGACGGC ACTGTTCCAC
ATCTCCGAAG CGCTGGTGCG CTGGATCGCG CCGATCCTGG CGTTCACCGC CGACGAGCTG
TGGCAGTTCC TGCCCGGCGA GCGCAACGAA TCGGTGATGC TCAACACCTG GTACGACGGC
CTGACCGAAA TGCCGGCCGA CTTCGACATG GACCGCGCCT ACTGGGAGCG GATCATGGCG
GTGAAGACCT CGGTCAACAA GGAAATGGAA AACCTGCGCG CTGCCAAGGC CATTGGCGGC
AACCTGCAGG CTGAAGTGAC CCTGTATGCC GAGGAGTCGC TGGTGGCTGA CCTGTCGAAG
CTGAGCAACG AGCTGCGCTT CGTGCTGATC ACCTCGACAG CCAGTGTGGC ACCGCTCGCG
TCCGCGCCAG CCGATGCCGT GGTCACCGAA GTCGCTGGGC TGAAACTGAA AGTGCTCAAG
TCCAGTCATG CCAAATGCGC CCGTTGCTGG CATCACCGCG AGGATGTAGG GGTCAACCCC
GAGCATCCGG AAATCTGCGG TCGTTGCGTA GACAACATCA GCGGTGCAGG CGAGGTCCGT
CACTATGCCT AA
 
Protein sequence
MTDYKATLNL PDTAFPMKAG LPQREPQTLQ RWDSIGLYQK LREIGKDRPK FVLHDGPPYA 
NGNIHIGHAV NKILKDMILR SKTLAGFDAP YVPGWDCHGL PIEHKVEVTH GKNLSADRTR
ELCRAYASEQ IEGQKSEFIR LGVLGDWSNP YLTMNFANEA GEIRALAEMV KGGFVFKGLK
PVNWCFDCGS ALAEAEVEYQ DKKSSTIDVA FPIADEAKLA AAFGVPSLGK PASIVIWTTT
PWTIPANQAL NVHPEFEYAL VDVGDKLLVL AAELVESCLA RYKLEGTVIA TTTGQALELI
NFRHPFYDRL SPVYLADYVE LGAGTGIVHC SPAYGVDDFT ICKQYGLSND DIISPVQSNG
VYVESLEFFG GQFIFKANQN IIDKLVEVGS LMDTETISHS YMHCWRHKSP LIYRATAQWF
VGMDKQPESG ETLRKRAVKA IEDTEFVPAW GQARLHSMIA NRPDWCISRQ RNWGVPIPFF
LHKESGDLHP RTVELMEEVA QRVEKEGIEA WFKLDASELL GDEAGKYDKI SDTLDVWFDS
GTTHWHVLRG SHPMGHESGP RADLYLEGSD QHRGWFHSSL LTGCMLDDHA PYRELLTHGF
VVDENGRKMS KSLNNVVAPQ KVNDSLGADI MRLWVSATDY SGEMAVSDQI LQRSADAYRR
IRNTARFLLS NLTGFNPATD ILPAEEMLAL DRWAVDRTLL LQRELLEHYG EYRFWNVYSK
IHNFCVQELG GFYLDIIKDR QYTTAANSTA RRSCQTALFH ISEALVRWIA PILAFTADEL
WQFLPGERNE SVMLNTWYDG LTEMPADFDM DRAYWERIMA VKTSVNKEME NLRAAKAIGG
NLQAEVTLYA EESLVADLSK LSNELRFVLI TSTASVAPLA SAPADAVVTE VAGLKLKVLK
SSHAKCARCW HHREDVGVNP EHPEICGRCV DNISGAGEVR HYA