Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0708 |
Symbol | |
ID | 3366191 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 810854 |
End bp | 812440 |
Gene Length | 1587 bp |
Protein Length | 528 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637651053 |
Product | virulence factor MVIN-like |
Protein accession | YP_233814 |
Protein GI | 66043973 |
COG category | [R] General function prediction only |
COG ID | [COG0728] Uncharacterized membrane protein, putative virulence factor |
TIGRFAM ID | [TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) [TIGR01695] integral membrane protein MviN |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.933126 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGGCT TAATCGCCCA TCCTTTGCCA AGGCGCACAA CTCTTTCAAT GAATCTACTC AAGTCACTCG CCGCCGTCAG CTCTATCACC ATGGTTTCCA GGGTTCTGGG CTTTGTCCGC GACACCATCA TCGCGCGCAC TTTCGGTGCC GGAATGGCCA CGGATGCGTT CTTCATCGCC TTCAAGCTGC CCAATCTGCT GCGCCGTATT TTCGCCGAGG GTGCCTTTTC CCAGGCATTC GTGCCGATCC TGGCCGAGTA CAAGAGCCAG CAGGGGGAGG AGGCGACGCG TACCTTCATT TCGTATGTCA CCGGGCTGCT GACCCTTGCG CTGGCGCTGG TGACACTGCT CGGAGTGATA TTTGCGCCCT GGGTGATCTG GGCCACCGCG CCCGGCTTTG TCGACACCCC GGAGAAGTTC GCCCTCACCT CGGACCTGCT GCGGGTGACC TTTCCTTATA TATTGCTGAT CTCCCTGTCC TCGATGGCCG GGGCGATCCT CAATACCTGG AACCGTTTCT CGGTGCCGGC GTTCGTGCCT ACGCTGCTCA ACGTCAGCAT GATTTTCTTC GCGCTGTTCC TGACGCCGTA TTTCGATCCG CCGGTCATGG CGCTGGGCTG GGCGGTTCTG GTGGGCGGCC TGCTGCAGCT GCTTTACCAA CTGCCGCACC TGAAAAAGAT CGGCATGCTG GTGCTGCCGC GCCTGAATCT GCGCGACACC GGGGTCTGGC GGGTAATGAA GCAGATGCTG CCCGCCATCC TTGGCGTTTC TGTCAGTCAG ATTTCTCTGA TCATCAACAC GATCTTTGCC TCGTTCCTCG TCGCCGGTTC GGTGTCATGG ATGTACTACG CCGACCGTTT GATGGAGCTG CCCTCCGGTG TGCTGGGTGT GGCGCTGGGT ACGATTCTGC TGCCGATACT GTCCAAAACC TACGCGCAAC GGGATCGCCA GGAATATTCG CGGATTCTCG ACTGGGGTCT GCGGCTGTGT TTCGTGCTGG TCCTGCCTTG CACCCTGGCG CTGGGGCTGC TCGCCGAACC ATTGACCGTT TCGTTGTTTC AGTATGGTAA ATTCGACGCG CTCGACGCGG CTATGACCCA GCGTGCGCTG GTCGCCTATT CGGTCGGTTT GCTGGGGATC ATCCTGATCA AGGTGCTGGC CCCCGGTTTT TATGCTCAAC AAAATATCCG CACCCCGGTG AAAATCGCGA TCTTCACCCT CATAGTGACT CAACTGCTCA ACCTGGCCTT CATCGTGCCC TTGCAGCATG CCGGTCTGGC GCTGGCGATC AGTGTGGGGG CGTGCATCAA TGCCGGGTTG TTGTTCTGGC AGTTGCGCAA GCAGGATCTG TTTCAGCCGC AGCCAGGCTG GACGAAGTTC CTGTTCAAGC TGGTGATTGC CGTCGCGGTG ATGTCGGCGG TGCTGCTGGG GCTCATGCAT GTCATGCCGG CGTGGGACGA AGGTCACATG CTGGAGCGTT TTCTGCGTCT GGGTGCGCTG GTTGCAGCCG GCGTCGTGAC CTATTTCGCC ATGCTTCTTT TATTAGGCTT CCGCCTCCGG GATTTCGCCC GCAAAGCCAT TATGTAG
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Protein sequence | MAGLIAHPLP RRTTLSMNLL KSLAAVSSIT MVSRVLGFVR DTIIARTFGA GMATDAFFIA FKLPNLLRRI FAEGAFSQAF VPILAEYKSQ QGEEATRTFI SYVTGLLTLA LALVTLLGVI FAPWVIWATA PGFVDTPEKF ALTSDLLRVT FPYILLISLS SMAGAILNTW NRFSVPAFVP TLLNVSMIFF ALFLTPYFDP PVMALGWAVL VGGLLQLLYQ LPHLKKIGML VLPRLNLRDT GVWRVMKQML PAILGVSVSQ ISLIINTIFA SFLVAGSVSW MYYADRLMEL PSGVLGVALG TILLPILSKT YAQRDRQEYS RILDWGLRLC FVLVLPCTLA LGLLAEPLTV SLFQYGKFDA LDAAMTQRAL VAYSVGLLGI ILIKVLAPGF YAQQNIRTPV KIAIFTLIVT QLLNLAFIVP LQHAGLALAI SVGACINAGL LFWQLRKQDL FQPQPGWTKF LFKLVIAVAV MSAVLLGLMH VMPAWDEGHM LERFLRLGAL VAAGVVTYFA MLLLLGFRLR DFARKAIM
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