| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_0682 |
|---|
| Symbol | |
|---|
| ID | 3366165 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 784699 |
|---|
| End bp | 786792 |
|---|
| Gene Length | 2094 bp |
|---|
| Protein Length | 697 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637651029 |
|---|
| Product | exodeoxyribonuclease V, alpha subunit |
|---|
| Protein accession | YP_233790 |
|---|
| Protein GI | 66043949 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
|---|
| TIGRFAM ID | [TIGR01447] exodeoxyribonuclease V, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCGCT CGTTCGATGA TCTGTTGCCT ACCGCGCTGG ACGACATCAG CCTCGCTGAG
TTGAGCCCGC TGACGCGTGT CAGCGATCTG CTGATCCTGC TCGAACGTTG GGTCGAGCGC
GGCTGGTTGC GTGCTCTGGA CAAGGCGTTC GTCGCGTTCC TCAGTGACCT CGATCCGCAG
GCCGATCCGT TGGTGCTGGT GGCTGCGGCG CTTACCAGCC ATCAGCTCGG CCACGGTCAC
GTCTGCCTTG ATCTGTACGA GACCCTCAAA GAACCGGACT TCGCCCTGTC ACTGCCACCT
GAAGGCGATC AGCAGAGCGC GCCGATGCTG CTCCCCTCAC AACTGTTGGC AGCGTTGGAT
GGTGCCGCTT GGTGCCAGGC GCTGGCAGCC AGCATGCTGG TCGCCGAGGT GGGCGATTTA
AGTGCCGAAG CGCGACAAAA GCCATTGGTG CTGGCCGAGC GGCGTCTGTA CCTGCGTCGC
TACTGGACTT ACGAACGGCG TATTGCTGCC GCCTTGCGTC AGCGCCTGGC CCAGCGTGAA
ACACCGCCGG AGGGTCTGCC GCAGCGGCTC GACGCATTGT TCGGCCCGGC CGATTCTTCG
CCACAAGCCG TCATCGACTG GCAGAAACTT GCCTGCGCAC TGGCGACCCG CAAGGGCTTC
AGCATCATCA CCGGCGGCCC CGGCACCGGC AAAACCACCA CGGTGGTGCG CCTGCTGGCT
TTGTTGCAGG CACCGGCGGT ACAGAGTGGC CAGCCGCTGC GCATCCGTCT CGCGGCACCC
ACCGGCAAGG CGGCGGCACG TCTGACCGAG TCCATCAGCC AACAGGTGCA GAGCCTGGAC
GTCAGTGACG ACGTACGCCA GAAAATCCCC AGCGAGGTGA CCACCGTCCA CCGCCTGCTG
GGCAGTCGCC CCGGTACCCG GCACTTCCGC CACCATGCGG GTAATTTACT GCCGCTGGAT
GTGCTGGTGG TTGATGAAGC CTCCATGATC GACCTGGAAA TGATGGCTAA CCTGCTCTAC
GCACTGCCTG CGCATGCACG CATGGTTCTG CTGGGTGACA AGGACCAGCT GGCATCCGTT
GAGGCGGGGG CGGTACTCGG GGATTTGTGC CGCGACGCCG AAGAAGGTTT CTACAGCCCC
GACACCCAGG CCTGGCTGGA AGCCGTCAGC GGCGAAGACC TCGGCAAGGG CGGTTTGCGC
CAGGGCGATG CGCAGCAGCA TCCGTTGGCC CAGCAAGTGG TGATGCTGCG CCACTCACGT
CGTTTCGGCC AAGGCAGCGG TATCGGCCAG TTGGCCCGGC TGGTCAACCA GCAACAGGAC
CAACAGGCCC GCGCGCTGCT GTCGGCGGGC AGTCATGACG ACCTGTTCGC CTTGGCTCTC
AAGGGCGAGC AGGACCTCAA GTTCGAACGC CTGGTGCTCG ACGGTCTTGG CAGGGGCGAG
CAAGGTCCGC AGGGTTACCG GCATTACCTG AACGTACTCG CCGCCGAGCG TCCCGCCGAT
GATTCGGCAC TGGACGACGC GTGCTGGACC CGCTGGGCGC GCTCGGTACT CAGCGCCTTC
GATGCCTTTC AACTGCTGTG TGCCGTGCGC AAAGGCCCGT GGGGCGTGGA AGGCTTGAAC
CAGCGCATCA CGCACGCGCT GTTCAGCGCG AAGCTGATCG AAAGCGAACA GCAATGGTAC
GAAGGTCGCC CGGTGCTGAT GACCCACAAC GACTACGGCC TCGGCCTGAT GAACGGCGAC
ATCGGCATCA CTTTGCGCCT GCCCGAGCGC GACGGCGAGG GCAAACAGGT GTTGCGCGTC
GCCTTCCCCC GCAACGACGG CAGCGAAGGC GTACGCTTCG TCCTGCCCAG CCGCCTCAAC
GAGGTCGAAA CCGTGTACGC CATGACCGTA CACAAATCCC AGGGCTCGGA ATTCGCCCAC
ACCGCCCTGA TCCTGCCCGA AGCGCTCAAC CCGGTACTGA CCAAGGAGCT CATCTACACC
GGCATCACCC GCGCCAAGCA CTGGTTCAGC CTCATCGAAC CGCGCCAGGG CATCTTCGAA
GAAGCCCTGC GCCGCAAGGT CAAACGCCTG AGTGGGTTGA TGCTGGGGCT TTGA
|
|---|
| Protein sequence | MSRSFDDLLP TALDDISLAE LSPLTRVSDL LILLERWVER GWLRALDKAF VAFLSDLDPQ
ADPLVLVAAA LTSHQLGHGH VCLDLYETLK EPDFALSLPP EGDQQSAPML LPSQLLAALD
GAAWCQALAA SMLVAEVGDL SAEARQKPLV LAERRLYLRR YWTYERRIAA ALRQRLAQRE
TPPEGLPQRL DALFGPADSS PQAVIDWQKL ACALATRKGF SIITGGPGTG KTTTVVRLLA
LLQAPAVQSG QPLRIRLAAP TGKAAARLTE SISQQVQSLD VSDDVRQKIP SEVTTVHRLL
GSRPGTRHFR HHAGNLLPLD VLVVDEASMI DLEMMANLLY ALPAHARMVL LGDKDQLASV
EAGAVLGDLC RDAEEGFYSP DTQAWLEAVS GEDLGKGGLR QGDAQQHPLA QQVVMLRHSR
RFGQGSGIGQ LARLVNQQQD QQARALLSAG SHDDLFALAL KGEQDLKFER LVLDGLGRGE
QGPQGYRHYL NVLAAERPAD DSALDDACWT RWARSVLSAF DAFQLLCAVR KGPWGVEGLN
QRITHALFSA KLIESEQQWY EGRPVLMTHN DYGLGLMNGD IGITLRLPER DGEGKQVLRV
AFPRNDGSEG VRFVLPSRLN EVETVYAMTV HKSQGSEFAH TALILPEALN PVLTKELIYT
GITRAKHWFS LIEPRQGIFE EALRRKVKRL SGLMLGL
|
|---|
| |