| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_0626 |
|---|
| Symbol | |
|---|
| ID | 3366104 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 715229 |
|---|
| End bp | 715876 |
|---|
| Gene Length | 648 bp |
|---|
| Protein Length | 215 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637650968 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_233734 |
|---|
| Protein GI | 66043893 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0586] Uncharacterized membrane-associated protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAATTCA ACCCGCTCGA CCTTATTCTG CATCTCGACG TTTACCTTGA CCTGTTGGTG
ACCAACTACG GTACATGGGT CTATGCGATT CTGTTTTTGG TGATTTTCTG CGAGACCGGA
CTGGTGATCA TGCCCTTCCT GCCGGGCGAC TCGCTGCTGT TCATCGCTGG CGCCGTGGCT
GCTGGCGGCG GCATGGACCC GGTCCTGCTG GCCGGGTTGC TGATGCTCGC AGCGATTCTG
GGCGACAGCA CCAACTACGT GATTGGCCGC ACGGTCGGCG AAAAACTGTT CAGCAATTCG
TCATCGCGAA TCTTCCGCCG CGACTACCTG CTGCGCACCC AGAATTTCTA CGCACGCCAC
GGCGGCAAGA CCGTCACGCT GGCGCGCTTC CTGCCGATTA TCCGCACCTT CGCGCCCTTC
GTCGCGGGCG TCGGCAGAAT GTCCTATCCG CGCTTCGTGG GCTTCAGCGT GCTGGGCTCG
GTGCTGTGGG TCGGCAGCCT GGTGACACTG GGCTTCTTCT TCGGCAACGT GCCATTCATC
AAGCACAACC TGACCTTTCT GGTACTGGCA ATCATCCTGC TGTCGCTGGT GCCGATGGTC
ATTGGCGTAG TGCGCAGCCG CAGCGCGCGT CCGGTCGACG CGCGCTGA
|
|---|
| Protein sequence | MEFNPLDLIL HLDVYLDLLV TNYGTWVYAI LFLVIFCETG LVIMPFLPGD SLLFIAGAVA
AGGGMDPVLL AGLLMLAAIL GDSTNYVIGR TVGEKLFSNS SSRIFRRDYL LRTQNFYARH
GGKTVTLARF LPIIRTFAPF VAGVGRMSYP RFVGFSVLGS VLWVGSLVTL GFFFGNVPFI
KHNLTFLVLA IILLSLVPMV IGVVRSRSAR PVDAR
|
|---|
| |