Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0607 |
Symbol | |
ID | 3366085 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 696911 |
End bp | 698077 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637650949 |
Product | cystathionine beta-lyase |
Protein accession | YP_233715 |
Protein GI | 66043874 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
TIGRFAM ID | [TIGR01324] cystathionine beta-lyase, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.952184 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.104106 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCAAG ACAAAGACCC TCGTGCCCAC ACCGCCCTGT CGCAACGCGG CCGCAGCGCC GGCAGCGGGC CCGGGATTGC GGTCAACCCA CCCGTCGTGC GCCTCAGTAC GGTGCTGTTC GACAGTCTGG AAAGCTTGCG GCAGGCGGAA ATTCGCACCA CGGGGCCGGA GCGCTCGTTG ACTTACGGCG CCAACGGCAA CCCGACTGCG TTTGCCTTGC AGGACCTGAT CTCCGAGCTC GAAGGCGCAC ACGGCACCTG CCTGTACCCG ACCGGGCTGG CCGCAGTGGC ACAGATGTTT CAATCGTTTC TGCGCCCAGG CGATCATGTC CTGATCACCG AATCGGTCTA TGGCCCTGTT CGACGGCTGG CGAAAACCAT GCTGACCGCC TTCGACATCC AGTTCGACTT CTACGCGGCC GACGGCAGTA ACGTGGAATC GCTGATCAAG GCCAACACCC GGATGATCTA TGCCGAGGTG CCCGGCTCGC TGACATTCGA CATGTGTGAC CTGCCCGCCC TGTCACAGCT GTGCAAAGCA AGGAATCTGC TGCTGGCTGT GGATAACTCC TGGGGCTCGG GGGTGCTGTA CAAGCCGCTG GCGCTGGGCG CGGACATTTC GCTGATGGCC CTGACCAAGT ACGTGGCCGG CCATTCCGAC GTCATGATGG GCAGCGTCAG CACCACCGAA GCGCATTGGC ATACCCTGAA AACCATGAAC ACCGCCGTGG GCAATACCGT CAGCCCCGAC GATGCCTATC TGGTGCTGCG TGGTGCCCGC AGCCTGGCGG CGCGCATGGC CATGCATGAG CGCCATGCGC TGCAGATCGC ACAATGGCTG CAGGCCCAGC CTCAGGTTGC CCGCGTGCTC TATCCCGCTT TGCCGGACGA TCCAGGCCAC GCGATCTGGA AGCGCGATTT CCATGGCTGC AACGGCTTGC TCAGTTTCGA ATTCAACACC GCTGACCGGC AGGTGCTGGA TCGCTTTACC GGCGCGTTGA AACTGTTCGG CATCGGCTAT TCCTGGGGTG GTTTTGAAAG CCTGATCACG GAAGTGGAAC AACACGGTCC CGAGCGCGGT GCAGGGCCGA TGCTGCGGCT GCAGGTCGGC CTGGAAAGCC CGGAAGACCT GATCGCAGAC CTGCGCAACG GATTCGCGGC AGAGTGA
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Protein sequence | MPQDKDPRAH TALSQRGRSA GSGPGIAVNP PVVRLSTVLF DSLESLRQAE IRTTGPERSL TYGANGNPTA FALQDLISEL EGAHGTCLYP TGLAAVAQMF QSFLRPGDHV LITESVYGPV RRLAKTMLTA FDIQFDFYAA DGSNVESLIK ANTRMIYAEV PGSLTFDMCD LPALSQLCKA RNLLLAVDNS WGSGVLYKPL ALGADISLMA LTKYVAGHSD VMMGSVSTTE AHWHTLKTMN TAVGNTVSPD DAYLVLRGAR SLAARMAMHE RHALQIAQWL QAQPQVARVL YPALPDDPGH AIWKRDFHGC NGLLSFEFNT ADRQVLDRFT GALKLFGIGY SWGGFESLIT EVEQHGPERG AGPMLRLQVG LESPEDLIAD LRNGFAAE
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