| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_0506 |
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| Symbol | putA |
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| ID | 3365982 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 557685 |
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| End bp | 561638 |
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| Gene Length | 3954 bp |
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| Protein Length | 1317 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637650846 |
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| Product | trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase |
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| Protein accession | YP_233614 |
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| Protein GI | 161486739 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0506] Proline dehydrogenase
[COG4230] Delta 1-pyrroline-5-carboxylate dehydrogenase |
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| TIGRFAM ID | [TIGR01238] delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCACCA CCACTCTGGG CGTCAAACTT GACGACCCGA CCCGCGAGCG TTTGAAAGCC
GCAGCCCACT CCATCGACCG TACGCCGCAC TGGTTGATCA AGCAGGCGAT TTTCAATTAC
CTGGAAAAGC TCGAGAGTGG TGCAACCCTG CTGGAGCTCG ACGGTGCTGC CGGCAAGGAC
AACGAAGACC GCGGCGAGCT GGCAGAAGAG GCGGGGCTGC AATGCTTTCT GGATTTTGCC
GAGAGCATTC AACCGCAGTC CGTGTTACGT GCAGCCATCA CCTCCGCCTA CCGCCGCCCC
GAGCCGGAAG TGGTACCTAT GCTGCTCGAG CAGGCACGCC TGAGCGCGCC GGTTGCCGAA
GCCACCAACA AGATGGCCGC GTCGATTGCG GAGAAACTGC GTAACCAGAA AAGCGCCGGC
GGTCGCGCGG GCATCGTTCA GGGCCTGTTG CAGGAGTTTT CACTGTCTTC CCAGGAGGGC
GTCGCGCTGA TGTGCCTGGC CGAAGCGCTG CTGCGTATTC CGGACAAGGG CACCCGCGAT
GCCTTGATTC GCGACAAGAT CAGCAACGGC AACTGGCAGC CGCACCTGGG CAACAGCCCG
TCGCTGTTCG TCAACGCCGC CACCTGGGGC CTGCTGCTGA CAGGCAGGCT GGTCGCCACT
CACAATGAAG CGGGCCTTAC ATCCTCGCTG AGCCGCATCA TCGGCAAAAG CGGCGAACCG
ATGATCCGCA AGGGCGTCGA CATGGCCATG CGCCTGATGG GCGAGCAGTT CGTCACCGGC
GAAACCATCG GTGAAGCCCT GGCCAATGCC AGTCGCTTCG AAGCCAAGGG CTTTCGCTAC
TCCTACGACA TGCTGGGTGA AGCGGCGCTG ACCGAACATG ACGCGCAGAA GTACCTGGCG
TCCTACGAGC AGGCTATCCA CTCCATCGGC AAAGCCTCGC ACGGTCGCGG CATCTACGAA
GGTCCGGGGA TTTCCATCAA GCTGTCGGCG CTGCACCCGC GCTACAGCCG CGCCCAGTAC
GAGCGGGTGA TGGATGAACT GTACCCGCGC CTGCTGTCGC TGACCCTGCT CGCCAAGCAG
TACGACATCG GCCTGAACAT CGACGCCGAA GAAGCCGATC GCCTGGAGCT GTCGCTGGAT
CTGCTCGAGC GCCTGTGTTT CGAACCACAG CTCACCGGCT GGAATGGCAT CGGCTTCGTG
ATTCAGGCGT ATCAGAAGCG CTGCCCTTAT GTGATCGATT ACGTGATCGA CCTGGCGCGC
CGCAGCCGCC ATCGTCTGAT GATCCGTCTG GTCAAGGGCG CGTACTGGGA CAGCGAGATC
AAGCGCGCCC AGGTCGAAGG CCTGGAAGGC TATCCGGTGT ACACGCGCAA GGTGTACACC
GACGTGTCCT ACATCGCCTG CGCCCGCAAG TTGCTCGCGG CACCGGAAGT CATCTATCCA
CAATTTGCCA CACACAACGC CCACACCCTG GCGGCGATCT ACCAGATCGC CGGGCAGAAT
TATTACCCTG GCCAGTATGA ATTCCAGTGC CTGCACGGCA TGGGCGAGCC GTTGTATGAG
CAGGTTGTAG GCAAAGTCGC CGACGGCAAA CTGAATCGTC CTTGCCGCGT GTACGCCCCG
GTTGGCACCC ATGAAACGCT GCTGGCCTAT CTGGTGCGTC GCCTGCTCGA AAACGGCGCC
AACACCTCGT TCGTCAACCG GATTGCCGAC CACTCGATCT CGATTCAGGA ACTGGTCGCC
GATCCGGTCA GCCAGATCGA ACGCATGGCG ACCCAGGAAG GCGGTTTCGG CCTGCCGCAC
CCACGCATTC CGCTGCCACG TGACCTGTAC GGAACCGAAC GCGCCAACTC CAGCGGCATC
GACATGGCCA ACGAACATCG TCTGGCTTCG CTGTCTTCGG CCCTGCTGGC TACCGCGCAC
AACGACTGGA AAGCCGCCCC GATGCTGGGC TGCCCGGCCA GCGCAGGCAC GTTGAGTGCT
GCCTTGAACC CATCGGACCT GCGTGACGTG GTCGGTCATG TACAGGAAGC GTCCCTGCAG
GATGTCGATA ACGCCATCCA GTGCGCCTTG AGCGCCGGTC CGATCTGGCA GGCCACTCCG
CCTGTCGAGC GCGCTGCGAT TCTGGAGCGT GCCGCTGACT TGATGGAGGC TGAAATCCAG
CCGTTGATGG GCCTGCTGGT CCGTGAAGCG GGCAAGACCT TCGCCAACGC TATCGCCGAA
GTGCGCGAAG CCGTGGACTT CCTGCGTTAC TACGCCGTGC AGGCGCGCAA CGACTTCACC
AACGACGGCC ACCGTCCGTT GGGGCCGGTG GTCTGCATCA GCCCGTGGAA CTTCCCGCTG
GCGATTTTCA GTGGTCAGGT AGCTGCTGCA TTGGCTGCCG GTAACCCGGT GCTGGCCAAA
CCTGCCGAGC AGACGCCGCT GATCGCCGCA CAGGCCGTGC GCCTGCTGCT TGAAGCGGGC
ATTCCGGAAG GCGTAGTGCA ATTGCTGCCG GGTCGCGGCG AAACCGTAGG TGCCGGACTG
GTCGGCGATG AACGTGTGAA GGGTGTCATG TTTACCGGTT CAACCGAGGT AGCCCGCCTG
CTGCAGCGCA ACGTCGCAGG TCGCCTCGAC TCACAGGGTC GCCCCATTCC GCTGATCGCC
GAAACCGGTG GCCAGAACGC GATGATCGTC GACTCTTCGG CGCTGACCGA ACAGGTGGTG
ATCGACGTAG TGTCTTCGGC GTTCGACAGC GCCGGTCAGC GCTGCTCGGC ACTGCGCGTG
CTGTGCCTGC AGGAAGATTC TGCCGACCGC GTCATCGAAA TGCTCAAGGG CGCGATGGCC
GAGAACCGCC TCGGCAATCC GGAGCGCCTG TCGGTAGACA TCGGCCCGGT GATCGACGCA
GAGGCCAAGG CCGGTATCGA AAAACACATC CAGGCCATGC GCGACAAGGG CCGCACGGTC
TATCAGGTGG CCATCGCCGA CAGCGCCGAA CTCAAGCGTG GCACTTATGT GATGCCGACC
CTGATCGAAC TGGAAAGCTT CGATGAGCTG CAACGCGAAA TCTTCGGGCC GGTACTGCAC
GTGGTGCGTT ACAAGCGCAA GGAGCTTGGC CTGCTGATCG ATCAGATCAA TGCCTCCGGT
TATGGCCTGA CCCTGGGCGT GCACACGCGC ATCGACGAGA CCATCGCCAA GGTCATCGAC
AACGTCAATG CCGGCAACGT CTACGTCAAC CGCAACATCG TCGGCGCCGT GGTGGGTGTT
CAGCCATTCG GCGGCGAAGG CCTGTCCGGC ACCGGCCCCA AAGCGGGTGG CCCGTTGTAC
CTGTATCGCC TGCTGTCGAC GCGTCCGCAG GATGCTATCG AGAAATCGTT CGTCCGCAGC
GACGCGCTGT CTGCGCCGGA TACCCGCCTG CGTGAAGTCC TCGGCAAGCC GTTGCAGGCA
CTGAAGGCCT GGGCTGCCAG CAACCAGCAA AGCGATCTGG ACGCGCTGTG CAGTCAATAC
GCCGAGCAAT CGCAAAGCGG CATCACCCGC CAGTTGGCAG GCCCGACCGG CGAACGCAAC
AGCTACGCGA TCCTGCCGCG TGAACACGTA CTTTGCCTGG CTGACGACGA GAACGACCTG
CTGATTCAAC TGGCAGCCGT ACTGGCGGTC GGCAGCTCTG CCGTGTGGCC GGAAACCGAC
ATCGGCAAAC CGCTGCGTGC TCGCCTGCCA AAGGACGTTC AGGCGCGCAT CAAACTGATA
CCTGACTGGG CCAAGGACGA AGTCATCTTC GACGCCGTCC TGCACCATGG CGACTCCGAT
CAGCTACGTG CCATCTGCCA GCAGATCGCA CAACGCAGCG GTGCCATCGT CGGCGTAAAC
GGCCTGTCCC ACGGCGAAAC CAACGTACCG CTGGAACGTC TGGTGATCGA GCGGGCATTG
AGCGTCAACA CTGCGGCGGC GGGTGGCAAT GCGAGCCTGA TGACGATCGG CTGA
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| Protein sequence | MATTTLGVKL DDPTRERLKA AAHSIDRTPH WLIKQAIFNY LEKLESGATL LELDGAAGKD
NEDRGELAEE AGLQCFLDFA ESIQPQSVLR AAITSAYRRP EPEVVPMLLE QARLSAPVAE
ATNKMAASIA EKLRNQKSAG GRAGIVQGLL QEFSLSSQEG VALMCLAEAL LRIPDKGTRD
ALIRDKISNG NWQPHLGNSP SLFVNAATWG LLLTGRLVAT HNEAGLTSSL SRIIGKSGEP
MIRKGVDMAM RLMGEQFVTG ETIGEALANA SRFEAKGFRY SYDMLGEAAL TEHDAQKYLA
SYEQAIHSIG KASHGRGIYE GPGISIKLSA LHPRYSRAQY ERVMDELYPR LLSLTLLAKQ
YDIGLNIDAE EADRLELSLD LLERLCFEPQ LTGWNGIGFV IQAYQKRCPY VIDYVIDLAR
RSRHRLMIRL VKGAYWDSEI KRAQVEGLEG YPVYTRKVYT DVSYIACARK LLAAPEVIYP
QFATHNAHTL AAIYQIAGQN YYPGQYEFQC LHGMGEPLYE QVVGKVADGK LNRPCRVYAP
VGTHETLLAY LVRRLLENGA NTSFVNRIAD HSISIQELVA DPVSQIERMA TQEGGFGLPH
PRIPLPRDLY GTERANSSGI DMANEHRLAS LSSALLATAH NDWKAAPMLG CPASAGTLSA
ALNPSDLRDV VGHVQEASLQ DVDNAIQCAL SAGPIWQATP PVERAAILER AADLMEAEIQ
PLMGLLVREA GKTFANAIAE VREAVDFLRY YAVQARNDFT NDGHRPLGPV VCISPWNFPL
AIFSGQVAAA LAAGNPVLAK PAEQTPLIAA QAVRLLLEAG IPEGVVQLLP GRGETVGAGL
VGDERVKGVM FTGSTEVARL LQRNVAGRLD SQGRPIPLIA ETGGQNAMIV DSSALTEQVV
IDVVSSAFDS AGQRCSALRV LCLQEDSADR VIEMLKGAMA ENRLGNPERL SVDIGPVIDA
EAKAGIEKHI QAMRDKGRTV YQVAIADSAE LKRGTYVMPT LIELESFDEL QREIFGPVLH
VVRYKRKELG LLIDQINASG YGLTLGVHTR IDETIAKVID NVNAGNVYVN RNIVGAVVGV
QPFGGEGLSG TGPKAGGPLY LYRLLSTRPQ DAIEKSFVRS DALSAPDTRL REVLGKPLQA
LKAWAASNQQ SDLDALCSQY AEQSQSGITR QLAGPTGERN SYAILPREHV LCLADDENDL
LIQLAAVLAV GSSAVWPETD IGKPLRARLP KDVQARIKLI PDWAKDEVIF DAVLHHGDSD
QLRAICQQIA QRSGAIVGVN GLSHGETNVP LERLVIERAL SVNTAAAGGN ASLMTIG
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