Gene Psyr_0488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0488 
Symbol 
ID3365964 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp525474 
End bp525884 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content55% 
IMG OID637650828 
Productresponse regulator receiver 
Protein accessionYP_233596 
Protein GI66043755 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACAAC ACGCCTCCGC CCTGAAAGTC ATGGTCATCG ATGATTCGAA GACCATCCGC 
CGCACCGCCG AAACACTGCT CAAGAACGCA GGCTGTGAAG TCATCACTGC GATAGACGGT
TTCGACGCGC TGGCCAAGAT TGCCGATAAC CACCCGCGAA TCATATTCGT CGATATCATG
ATGCCGCGTC TGGACGGTTA TCAGACCTGC GCGCTGATCA AGAACAACCG GGCATTCAAG
TCGACGCCGG TCATCATGCT GTCCTCCAAG GACGGCCTGT TCGACAAGGC CAAGGGGCGG
ATTGTCGGGT CCGATCAGTT TTTGACCAAG CCTTTCAGCA AGGAAGAACT GCTCAGCGCG
ATCAAGGCTC ATGTGCCGGG CTTCGTTGCA GCAGAACAAC ACATATCATG A
 
Protein sequence
MEQHASALKV MVIDDSKTIR RTAETLLKNA GCEVITAIDG FDALAKIADN HPRIIFVDIM 
MPRLDGYQTC ALIKNNRAFK STPVIMLSSK DGLFDKAKGR IVGSDQFLTK PFSKEELLSA
IKAHVPGFVA AEQHIS