Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0468 |
Symbol | |
ID | 3365944 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 506590 |
End bp | 507798 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637650808 |
Product | aminotransferase |
Protein accession | YP_233576 |
Protein GI | 66043735 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCAGACC AAGGTTCGCC GCGCCGCTTT GCGCGCATCG ATCGACTCCC CCCTTACGTG TTCAACATCA CCGCCGAGCT GAAAATGGCT GCTCGTCGTC GCGGTGAGGA CATTATCGAC CTGAGCATGG GCAACCCCGA CGGGGCCACA CCGCCGCACA TCGTCGACAA GCTGATCACC GTCGCCCAGC GCGAAGACAC CCACGGCTAC TCCACCTCGC GCGGCATTCC ACGCCTGCGC CGGGCGATTT CCAACTGGTA CAAGAAACGC TACGAGGTCG ACATCGACCC TGAAAGCGAA GCAATCGTGA CCATTGGTTC CAAGGAAGGC CTGGCCCACC TGATGCTCGC CACACTGGAC CAGGGCGACA CGGTGCTGGT GCCCAACCCC AGTTACCCGA TCCACATCTA CGGTGCCGTG ATTGCCGGCG CCCAGGTGCG ATCGGTGCCG CTGGTGCCTG GCGTGGACTT CTTCGACGAG CTGGAAAAAG CCATTCGCGG CTCGATTCCC AAGCCGAAGA TGATGATTCT GGGCTTTCCG TCCAACCCGA CTGCGCAATG TGTGGAGCTG GACTTCTTCG AGCGCGTGGT GGCCCTGGCC AAACAGTACG ACGTGCTGGT GGTGCATGAC CTGGCGTACG CCGACATCGT CTACGATGGC TGGAAAGCCC CGTCGATCAT GCAGGTGCCG GGTGCCAAGG ACATTGCCGT GGAGTTCTTC ACCCTGTCCA AGAGCTACAA CATGGCCGGC TGGCGGATTG GTTTCATGGT CGGCAACCCC GAACTGGTGA ATGCACTGGC GCGGATCAAG AGTTACCACG ACTACGGTAC CTTCACGCCA CTGCAGGTGG CTGCGATTGC CGCTCTGGAA GGCGATCAGC AATGCGTGCT CGACATTGCC GAGCAGTATC GCCAACGCCG CAACGTACTG GTCAAGGGCT TGCACGAACT GGGCTGGATG GTCGAGAACC CCAAGGCCTC GATGTACGTC TGGGCGAAGA TTCCACAGGC CTATGCGCAC CTGGGTTCGC TGGAGTTCGC CAAGAAGCTG TTGGCCGAAG CCAAGGTGTG TGTCTCGCCG GGCATCGGTT TCGGTGAGTA CGGCGACGAT CATGTGCGCT TCGCCCTGAT CGAGAACCAG GACCGCATCC GCCAGGCCGT TCGTGGCATC CGCAGCATGT TCAGGGCCGA CGACAAGCTC AAGTCCTGA
|
Protein sequence | MADQGSPRRF ARIDRLPPYV FNITAELKMA ARRRGEDIID LSMGNPDGAT PPHIVDKLIT VAQREDTHGY STSRGIPRLR RAISNWYKKR YEVDIDPESE AIVTIGSKEG LAHLMLATLD QGDTVLVPNP SYPIHIYGAV IAGAQVRSVP LVPGVDFFDE LEKAIRGSIP KPKMMILGFP SNPTAQCVEL DFFERVVALA KQYDVLVVHD LAYADIVYDG WKAPSIMQVP GAKDIAVEFF TLSKSYNMAG WRIGFMVGNP ELVNALARIK SYHDYGTFTP LQVAAIAALE GDQQCVLDIA EQYRQRRNVL VKGLHELGWM VENPKASMYV WAKIPQAYAH LGSLEFAKKL LAEAKVCVSP GIGFGEYGDD HVRFALIENQ DRIRQAVRGI RSMFRADDKL KS
|
| |