| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_0445 |
|---|
| Symbol | |
|---|
| ID | 3365921 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 482458 |
|---|
| End bp | 483309 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637650785 |
|---|
| Product | malonate decarboxylase subunit beta |
|---|
| Protein accession | YP_233553 |
|---|
| Protein GI | 66043712 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0777] Acetyl-CoA carboxylase beta subunit |
|---|
| TIGRFAM ID | [TIGR03133] malonate decarboxylase, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGATA ACGCACGGTT GCTGAATCAG CACAGTTTCA TCGAACTGGG TGCCCGACAG
CGCGCCCGTG CCTTGCTGGA TGCCGGCAGT TTCCGCGAAC TGCTCGGTCC GTTCGATCGG
GTCATGTCGC CGTGGCTGGC CATGCAGGGC GTGGTGCCTC AGGCGGATGA TGGCGTGGTG
GTCGGCAAAG GCACTGTCGA TGGTCGGCCA GTGGTCATCG CCGCCATCGA AGGTTCTTTT
CAGGGCGGCA GCATGGGCGA AGTCGGCGGT GCGAAGATGG CCGGTGCGCT GGAACTGGCC
GCCGAAGACA ACCGCAACGG CATTCCTACC GCCGCGATCG TGCTGCTGGA AACCGGTGGC
GTGCGTTTGC AGGAAGCCAA TCTGGGCCTG GCCGCGATTG CCGAGATTCA TGCCGCGATA
GTCGACCTGC GTCAGTACCA GCCGGTGATC GGTGTGGTGG CCGGCAGCGT CGGCTGCTTT
GGCGGGATGT CCATCGCCGC AGGGCTGTGC AGTTACCTGC TGGTGACTCA GGAAGCACGT
CTGGGCCTGA ACGGTCCGCA GGTGATCGAG CAGGAAGCCG GCATCGAAGA ATACGACTCC
CGCGACCGTC CGTTCATCTG GAGCCTGACC GGTGGCGAGC AACGCTTTGC CAGCGCGCTG
GTGGATGGTT TTGCTGCCGA TGATGTCGCC GATGTGCGCC AGCAGGTCAG CGGCTGGCTC
AAGCAGGGCG TGCCCGACAC GCATCGCAGC AGTCAGTACC CACTGTTCCT GCAACGTCTG
GCCAGCCTCG ACACTGAACC GCAAATCGAT CCGCAAAGCG TGCGCACCCT CTATCAAGGA
GCCCGGTCAT GA
|
|---|
| Protein sequence | MTDNARLLNQ HSFIELGARQ RARALLDAGS FRELLGPFDR VMSPWLAMQG VVPQADDGVV
VGKGTVDGRP VVIAAIEGSF QGGSMGEVGG AKMAGALELA AEDNRNGIPT AAIVLLETGG
VRLQEANLGL AAIAEIHAAI VDLRQYQPVI GVVAGSVGCF GGMSIAAGLC SYLLVTQEAR
LGLNGPQVIE QEAGIEEYDS RDRPFIWSLT GGEQRFASAL VDGFAADDVA DVRQQVSGWL
KQGVPDTHRS SQYPLFLQRL ASLDTEPQID PQSVRTLYQG ARS
|
|---|
| |