Gene Psyr_0425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0425 
Symbol 
ID3365901 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp463950 
End bp465146 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content65% 
IMG OID637650765 
Product3-oxoacyl-(acyl carrier protein) synthase I 
Protein accessionYP_233533 
Protein GI66043692 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCCT ATCTCAACGC GCTGGGCGTG ATCTGCTCGC TGGGCGACAG CCGTGAAGAG 
GTGTCGCGCA GGCTGTTCGC AGGCGACAGC TCGGGCATGG TGTTCGAAAG CGGCTGGGTG
CCGGAACGTG CGTTGCCGGT CGGCGCGGTC AAATCCGCAC TGCCGCCCAT TCCGCCTGCC
GTGCATTTGC ATCACAGCCG CAATAACCAG CTGCTGCTGG CCGCCGCCCT GCAGATCGAG
GAGGACATCA GCCAGGCCAT CACCCGCTTC GGCGCCGGGC GGATTGGCGT GATCATCGGC
ACCAGCACCT CGGGCATTGA TGAAGCGAGC GAGAGCATGG CCGTCTGGCT GCGTGAGCGG
ACCTTCCCCG ACGATTACGA TTATCGGCAA CAGGAACTGG GCGCACCGGC GAATTTTCTC
GCCGCCTGGC TGCAATTGAG CGGCCCGGCC TACGTCATCT CGACAGCCTG CACCTCCAGC
TCGCGGGCGT TGCTCAGTGC ACGGCGGGCG CTGGACATGG GCCTGTGCGA TGCCGTGCTG
TGCGGCGGCG TCGACAGCCT GTGCAGGCTG ACCCTGCAGG GGTTCTCGGC ACTCGAGGCC
ATGTCGCCGC AGCTCTGCAA CCCGTTCTCC AGCAACCGCA ACGGGATCAA TATCGGCGAG
GCGGCCGCGC TGTTCCTGAT GACTCGTGAA GCCGACAGCA GGCACTCGAT TGCCCTGCTG
GGCGCAGGTG CCAGCTGCGA CGCTCACCAC ATCTCGGCCC CCGAACCCAC CGGGCGTGGT
GCGCGCGATG CCATGCTGCA AGCGTTGCGC AATGCCCGAC TCGAGGCGGA ACAGATCGGT
TATCTGAACC TGCATGGCAC CGCCACGCCG CACAACGACG CGATGGAGAG CCTGGCCGTG
CAGGGGGTAT TTCCGAACGG CGTGCCCTGC TCGTCGACCA AACCGCTCAG CGGCCACACC
CTGGGCGCGG CAGGCGCGCT GGAAGCGGCG TTTTGCTGGC TGAGCCTGGC ACCGCAGAAT
ACCGAACAGG CCCTGCCCCC GCACTTGTGG GACGGCGAGG CCGATCCGCT CTTGCCAGCG
CTGCACTGGA CACATGCAGG CTCGCGCCTG ACACCTGAAA ACGCTCGTTA CATGATGAGC
AATTCGTTTG CCTTCGGTGG CAACAACATC AGCCTGATTA TCGGAGATGC CCCATGA
 
Protein sequence
MTAYLNALGV ICSLGDSREE VSRRLFAGDS SGMVFESGWV PERALPVGAV KSALPPIPPA 
VHLHHSRNNQ LLLAAALQIE EDISQAITRF GAGRIGVIIG TSTSGIDEAS ESMAVWLRER
TFPDDYDYRQ QELGAPANFL AAWLQLSGPA YVISTACTSS SRALLSARRA LDMGLCDAVL
CGGVDSLCRL TLQGFSALEA MSPQLCNPFS SNRNGINIGE AAALFLMTRE ADSRHSIALL
GAGASCDAHH ISAPEPTGRG ARDAMLQALR NARLEAEQIG YLNLHGTATP HNDAMESLAV
QGVFPNGVPC SSTKPLSGHT LGAAGALEAA FCWLSLAPQN TEQALPPHLW DGEADPLLPA
LHWTHAGSRL TPENARYMMS NSFAFGGNNI SLIIGDAP