Gene Psyr_0408 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0408 
SymbolaroK 
ID3365884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp438565 
End bp439083 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content60% 
IMG OID637650748 
Productshikimate kinase 
Protein accessionYP_233516 
Protein GI66043675 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0703] Shikimate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGAAATT TAATACTTGT GGGGCCGATG GGTGCTGGCA AGAGCACCAT CGGCCGTTTG 
CTTGCCAAAG AATTGCGACT GCCGTTCAAG GATTCCGACA AGGAAATCGA GCTGCGTACG
GGCGCCAATA TTCCCTGGAT CTTCGACAAA GAAGGCGAAC CGGGTTTTCG TGATCGCGAG
CAGGCCATGA TTGCCGAGCT GTGCGCCGCC GATGGCGTGG TTCTGGCGAC CGGCGGTGGT
GCGGTCATGC GCAGCGAAAA TCGCCATGCA CTGCGCGCCG GCGGGCGCGT GGTTTATCTG
CACGCCTCGA TCGAGCAACA GGTGGGGCGC ACCGCGCGTG ATCGCAATCG GCCTTTGCTG
CGTACCGCCG ATCCTGCCCG GGTACTGAGC GAGTTGCTGG CCATCCGTGA CCCGTTTTAT
CGGGAAATCG CCGATATAGT GATTGAAACC GATGAGCGGC CGCCCCGAAT GGTGGTTCTT
GAGATACTGG CGCGACTGGC AGAGCTTCCT CCCCGTTAA
 
Protein sequence
MRNLILVGPM GAGKSTIGRL LAKELRLPFK DSDKEIELRT GANIPWIFDK EGEPGFRDRE 
QAMIAELCAA DGVVLATGGG AVMRSENRHA LRAGGRVVYL HASIEQQVGR TARDRNRPLL
RTADPARVLS ELLAIRDPFY REIADIVIET DERPPRMVVL EILARLAELP PR