Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0382 |
Symbol | |
ID | 3365858 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 412955 |
End bp | 413755 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637650722 |
Product | Sec-independent periplasmic protein translocase |
Protein accession | YP_233490 |
Protein GI | 66043649 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0805] Sec-independent protein secretion pathway component TatC |
TIGRFAM ID | [TIGR00945] Twin arginine targeting (Tat) protein translocase TatC |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCTG ATACCCCGGA AAATGATCAG CAAATGCCGC TGATCTCGCA CCTCACCGAG CTGCGTACAC GTCTGTTGCG CTGCGTTGCG GCAGTCTTCC TGATTTTCGC CGGCCTGTTC TACTTCACGC AGAAGATCTA CACACTGGTC TCGGCGCCGC TGCGAGTCTA TCTGCCTGAA GGCGCAACGA TGATCGCCAC CGATGTGGCC TCGCCGTTCA TCACGCCGTT CAAGCTGACC ATGATGGTCG CGCTGTTTCT GTCCATGCCG GTCATCCTGC ATCAGATCTG GGGCTTCATC GCGCCGGGCC TGTACAAGCA CGAGAAGCGT GTCGCAGTGC CATTGCTGGT GTCGAGCATC ATCCTGTTCT ACGCAGGCAT GGCGTTCGCC TACTTCCTGG TCTTCCCGCT GATTTTCCAC TTCTTCGCCA GCGTGACGCC GGAAGGCGTG TCGATGATGA CCGACATCGC CAGCTACCTG GACTTCGTGA TGACGCTGTT CTTCGCCTTT GGCGTGGCCT TCGAAATCCC GGTGGCCGTG GTGTTGCTGG TGTGGATCGG CATCGTCGAC GTCAAGTACC TGAAGAAGAT CCGCCCTTAC GTGATCATCG GCTGCTTCGT GGTCGGCATG ATCCTCACGC CGCCGGACAT CTTCTCGCAG ACGCTGCTGG CGGTGCCGAT GTGGCTGCTC TTCGAGCTGG GCGTCCTGTG CAGCACGATG ATCAAGAAGC GTGGCGAACA TCCGGACGAT GAGGCCGAGG ACGCTGACAA GCAGGATCAG CCGCCCGCGA CCACTCCGTG A
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Protein sequence | MSADTPENDQ QMPLISHLTE LRTRLLRCVA AVFLIFAGLF YFTQKIYTLV SAPLRVYLPE GATMIATDVA SPFITPFKLT MMVALFLSMP VILHQIWGFI APGLYKHEKR VAVPLLVSSI ILFYAGMAFA YFLVFPLIFH FFASVTPEGV SMMTDIASYL DFVMTLFFAF GVAFEIPVAV VLLVWIGIVD VKYLKKIRPY VIIGCFVVGM ILTPPDIFSQ TLLAVPMWLL FELGVLCSTM IKKRGEHPDD EAEDADKQDQ PPATTP
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