Gene Psyr_0368 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0368 
Symbol 
ID3365844 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp392869 
End bp393447 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content60% 
IMG OID637650710 
Productlipoprotein Blc 
Protein accessionYP_233478 
Protein GI66043637 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3040] Bacterial lipocalin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAGG TACTGGTACG TTTTGGAATT TGTGTCATGG CCAGCTTCCT GGCCATCGGT 
TTTGCCCACT CGGCTGACAA CCTCGAGCCA AAGACTGTCG ACAGCGTCGA CCTCAAGCAG
TACCAGGGCA CCTGGTACGA GATCGCGCGT CTGCCGATGT TCTTCCAGCG CAAGTGCGCT
CAGTCCGAGG CGCGTTATAC GCTCAAGGAT GACGGCAACA TCGCGGTGAC CAACCGCTGC
CGCACGATTG AAGGCAAGTG GGAAGAAGCA ACGGGCACCG CCTCGCCGCA GGTTCCGGGC
AAGACCGACA AGCTGTGGGT TGTGTTCGAC AACTGGTTCT CGCGCCTGCT GCCGAGCGTT
GCCAAGGGTG ATTACTGGAT TCTGGACGTC AGCGAAGGCT ACCGCACCGC CGTGGTCGGC
AACCCGGATC GCAAATACCT GTGGCTGTTG TCGCGTACAC CGACCGTGTC TGCCTCGGTC
AGGGAAGACA TGCTCAGCAA GGCCCGCCAG CAAGGCTACG ACACCTCACG CCTGATCTGG
CGCGAGGATG ACTCGAAGAT TGGCAAGGGC GAGAAGTAA
 
Protein sequence
MIKVLVRFGI CVMASFLAIG FAHSADNLEP KTVDSVDLKQ YQGTWYEIAR LPMFFQRKCA 
QSEARYTLKD DGNIAVTNRC RTIEGKWEEA TGTASPQVPG KTDKLWVVFD NWFSRLLPSV
AKGDYWILDV SEGYRTAVVG NPDRKYLWLL SRTPTVSASV REDMLSKARQ QGYDTSRLIW
REDDSKIGKG EK