Gene Psyr_0323 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0323 
Symbol 
ID3365799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp340076 
End bp341305 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content65% 
IMG OID637650665 
Product2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase 
Protein accessionYP_233433 
Protein GI66043592 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism 
COG ID[COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases 
TIGRFAM ID[TIGR01988] Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.97579 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACGC GCGCAGATGT GCTGATTGTC GGAGCCGGAA TGGTCGGCAG TGCCCTTGCC 
TTGGCATTGC AGGACAGCGG CCTTGATGTG CTGGTGGTCG ACGGTGGGCC GCTGAGCGTC
GAACCGTTTG ATCAGCAGTC GAGCTTCGAG CCGCGGGTCA GCGCCTTGTC GGCGGCCAGC
CAGCGAATCC TTCAGCGGCT GGGCGTGTGG GAAGGCATCG CAGCCCGGCG CATCAGCCCG
TATGCGCATA TGCAGGTCTG GGACGGCAGC GGCACCGGGC AGATTCACTT CTCGGCCTCC
AGCGTGCATG CCGACGTGCT CGGTCACATC ATCGAGAATC GTGTGGTGCA GGACGCGTTG
CTCGACCGTC TGCATGCCAG CGACATCGGC CTGCTGGCCA ATGCGCGGCT TGAACAGATG
CGTCACTCCG GCGATGACTG GCTGCTGACC CTGGCTGATG GCCGTCAGCT GCGCGCACCG
CTGGTGGTGG CTGCCGACGG TGCCAATTCC GCCGTGCGCC GCCTGACTGA AACGCCGACG
CGTGAATGGG ATTACCTGCA TCACGCGATC GTCACCAGTG TGCGCACTGC CGATCCCCAC
AGGAAAACCG CCTGGCAGCG TTTCACCGAT GACGGGCCGC TGGCCTTTCT GCCACTGGAG
CGTGAGGGCG AGCACTGGTG TTCCATCGTC TGGTCAGTCA CACCTGCCGA AGCCGAGCGC
CTGATGGTGC TGGAAGATGA CCTGTTCTGC CGCGAACTGG AGCAGGCATT CGAAGGACGA
CTGGGCCAGG TGCTGTCTGC CGATAGCCGC CTGTGTGTGC CGCTGCGTCA GCGTCACGCC
AAGCGTTACG TTGCCGGAGG ATTGGCACTG ATTGGTGATG CGGCCCACAC CATTCACCCG
CTGGCCGGGC AGGGCGTGAA CCTCGGTTTT CTCGACGCCG CAGTGCTGGC GGAGGTCCTG
ACCCATGCCG CAAGGCGCGG CGAGCGCTGG TCTGACCTGC GTGTGCTGGG CCGCTACGAG
CGCCGCCGCA TGCCGCACAA CCTTGCACTG ATGGCCGCGA TGGAAGGCTT CGAACGCCTG
TTCCAGGCCG ACCCGCTGCC CTTGCGCTGG TTGCGCAACA CCGGCCTGAA AATGGTCAAC
CGCATGCCCG AAGCCAAGGC GCTGTTTGTC CGCGAGGCAC TGGGTTTGTC GGGGGATCTG
CCTGAACTGG CGCGGATCGA AGCACGCTAG
 
Protein sequence
METRADVLIV GAGMVGSALA LALQDSGLDV LVVDGGPLSV EPFDQQSSFE PRVSALSAAS 
QRILQRLGVW EGIAARRISP YAHMQVWDGS GTGQIHFSAS SVHADVLGHI IENRVVQDAL
LDRLHASDIG LLANARLEQM RHSGDDWLLT LADGRQLRAP LVVAADGANS AVRRLTETPT
REWDYLHHAI VTSVRTADPH RKTAWQRFTD DGPLAFLPLE REGEHWCSIV WSVTPAEAER
LMVLEDDLFC RELEQAFEGR LGQVLSADSR LCVPLRQRHA KRYVAGGLAL IGDAAHTIHP
LAGQGVNLGF LDAAVLAEVL THAARRGERW SDLRVLGRYE RRRMPHNLAL MAAMEGFERL
FQADPLPLRW LRNTGLKMVN RMPEAKALFV REALGLSGDL PELARIEAR