Gene Psyr_0322 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0322 
Symbol 
ID3365798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp338837 
End bp340024 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content65% 
IMG OID637650664 
Product2-octaprenyl-6-methoxyphenyl hydroxylase 
Protein accessionYP_233432 
Protein GI66043591 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism 
COG ID[COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases 
TIGRFAM ID[TIGR01984] 2-polyprenyl-6-methoxyphenol 4-hydroxylase
[TIGR01988] Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.657239 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGCT TCAATATCGC CATCGTCGGC GGCGGATTGG TCGGTGCGAG CCTTGCGCTG 
TCGCTGCAGG CCGGTGCCAA GGCGCGCGGC TGGAAAATCG TGCTCATCGA GCCCTTCGCG
CCGGGTGAAG CCTGGCAGCC CAGCTACGAT GCGCGTTCTT CGGCACTGTC GTTCGGCTCG
CGACGCATCT ATGAACGGCT TGGCCTCTGG CAGCAGATTT CCCGACGCGC CGAGCCGATC
CTGCAAATCC AGGTGTCGGA CCGGGGTCGC TTCGGCGCCA CTCGCCTGTC GGCGATCGAA
GAGGGCGTTC CGGCGCTTGG CTATGTAGTC GAAAACGCCT GGCTCGGTCA GGCTCTGTGG
GCCGGGCTGG ACCGTGATGT GGTCAGTTGG CGTGTGCCGG CCGAGGTCAA ACACATGCAG
CCATTGGCCG ATGGTTATCG CCTGAGCCTC AGTGACGACA GCGAACTGGA CTGCGACCTG
GCCGTGCTGG CCGACGGTGG CCGTTCCAGT CTGCGCGAAC AGTTGGGTAT CGGGGTGCGG
CAACGGCCTT ACGACCAGCA TGCGCTGATT GCCAATATCA CGCCGAGCGA AGCTCACTGC
GGGCAGGCGT TTGAACGTTT TACCGAAGAC GGGCCGATGG CGCTGCTGCC ATTGCCGGAT
AACCGCTGTG CGTTGGTCTG GACACGTCCG GGCAACGATA CCCAGCGTCT GGCCGAGCTG
GACGACCGCA GTTTTCTGGA AGAGCTGCAG GGCGTGTTTG GCTATCGCCT GGGCACGCTG
CGTCAGGTAG GTGCCCGGCA TGTCTACCCC TTGGCACTGA TCGAAGCCGA AGAGCAGGTG
CGCTCGCATC TGGTGATCCT GGGCAACGCG GCGCACAGTC TGCATCCGGT CGCCGGGCAG
GGGTTCAATC TGTCCTTGCG CGACGCCGAT GCACTGGCCG AGACGCTGCT GGACAGCGAC
GCGCCGCCCG GTGCGCTGCC GACGCTGCAG CTCTACCGTG AGCGCCAGCG CCAGGATCAG
CAATTGACCG TGGGCTTTTC CGACAAGGTG ACGCGCCTGT TCGGCAGCTC CCGGTCGGCG
GTTGCCACCG GGCGTAACGT CGGGTTGCTC GGCCTGGACC TGCTGCCTGC CGCCAAGCGC
TGGTTTGCCC GCCAGGCCAT GGGGTTGGGG ACTCGATCCG ATGTGTGA
 
Protein sequence
MSRFNIAIVG GGLVGASLAL SLQAGAKARG WKIVLIEPFA PGEAWQPSYD ARSSALSFGS 
RRIYERLGLW QQISRRAEPI LQIQVSDRGR FGATRLSAIE EGVPALGYVV ENAWLGQALW
AGLDRDVVSW RVPAEVKHMQ PLADGYRLSL SDDSELDCDL AVLADGGRSS LREQLGIGVR
QRPYDQHALI ANITPSEAHC GQAFERFTED GPMALLPLPD NRCALVWTRP GNDTQRLAEL
DDRSFLEELQ GVFGYRLGTL RQVGARHVYP LALIEAEEQV RSHLVILGNA AHSLHPVAGQ
GFNLSLRDAD ALAETLLDSD APPGALPTLQ LYRERQRQDQ QLTVGFSDKV TRLFGSSRSA
VATGRNVGLL GLDLLPAAKR WFARQAMGLG TRSDV