Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0306 |
Symbol | |
ID | 3365782 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 326643 |
End bp | 327308 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637650649 |
Product | TonB, C-terminal |
Protein accession | YP_233417 |
Protein GI | 66043576 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.768585 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAATGA CCGCGTTCAT GATTACCGCA GCACTGGCCG CTCACGTCGG CGCTGCAGAG CCATTTCTGG TGCCGATATA CACGCCGACA CCGGTTTTTC CGCCTGAGCT GGTCAAGACC CGCTATGCAG GCAAAGTCCG CGCCCAGTTG TGGATCAAGT CCGATGGGCA GGTTCGTGAA GTCCGGGCCG TCGAGAGCGG GCATCCGCAG CTCGCCGCAG CGGTGGAGCA GGCACTCCGC CAATGGCGCT ATAAACCCTG GGTCGGAACA GTCGGCGCGC CGCCCATGAC CACGATCACC GTGCCCGTCA TTTTTGGTTC CCACGGCTAT CGGCGCTTCA ACACCGAAGT GACCGTGGGC CTGGGAAACA TCCGCTGCGG CTACCTGAAC CACGAAGTGA AATCCGCCCG CCAGGACTAT CCCAAGGAAC CGCTGAGTAA GGTCGACGTG TTCTGGTACA CCGGGCAGGC GCTGTTCGGC AGCCATGTTG CCCACCTGCG CAGCGAGCCC CAACGCCAGG TCCTGCTTGA GCAACTGGGC GCCGCGATAC CGATGATGGT CAGCAATTGC CGAAGCAATC CCGATCGTCT GTACGGCGAT TATCTGCCAG CGCCGATCAA GGCGTTGATC GTCGGGCTGG CCGAGCAAGC GGAGGGCAGC GAATGA
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Protein sequence | MRMTAFMITA ALAAHVGAAE PFLVPIYTPT PVFPPELVKT RYAGKVRAQL WIKSDGQVRE VRAVESGHPQ LAAAVEQALR QWRYKPWVGT VGAPPMTTIT VPVIFGSHGY RRFNTEVTVG LGNIRCGYLN HEVKSARQDY PKEPLSKVDV FWYTGQALFG SHVAHLRSEP QRQVLLEQLG AAIPMMVSNC RSNPDRLYGD YLPAPIKALI VGLAEQAEGS E
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