Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0305 |
Symbol | glpT |
ID | 3365781 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 325019 |
End bp | 326368 |
Gene Length | 1350 bp |
Protein Length | 449 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637650648 |
Product | sn-glycerol-3-phosphate transporter |
Protein accession | YP_233416 |
Protein GI | 66043575 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | [TIGR00712] glycerol-3-phosphate transporter [TIGR00881] phosphoglycerate transporter family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.886958 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTGGGT TTTTCCGTCC TGCCAGGCAT CAGGCACCCC TTCCCGAAGA AAAGGTCGAC AGCACCTATC GGCGTCTGCG CTGGCAGATC TTCGCAGGCA TCTTTATCGG CTATGCGGGT TACTACCTGC TGCGCAAGAA TTTCTCGCTG GCGATGCCGT ATCTGATCGA CGAAGGCTAT ACGCGTGGCC AGCTGGGCGT GGCGATGTCT GCCATTGCCA TTGCCTACGG CTTGTCGAAA TTCCTCATGG GCATCGTTTC GGATCGCTCC AACCCGCGTT ACTTCCTGCC GTTCGGCCTG CTGGTCTCTG CCGGGATCAT GTTCATCTTC GGCTTCGCGC CGTGGGCGAC GTCCAGTGTC ACGATCATGT TCGTGCTGCT GTTCATCAAT GGCTGGGCAC AGGGCATGGG CTGGCCGCCG AGCGGGCGGA CAATGGTTCA CTGGTGGTCG CAGAAAGAGC GCGGCGGTGT GGTGTCGGTG TGGAACGTGG CGCACAACGT CGGCGGCGGC CTGATCGGCC CGCTGTTCCT GCTCGGCATG GGCTGGACCA ACGACTGGCA TGCGGCGTTC TACGTGCCGG CGGCGGTTGC GTTGCTGGTC GCGGTGTTCG CCTTCGCGAC CATGCGTGAC ACCCCGCAAT CGGTCGGCCT GCCGCCTATC GAGCACTACA AGAACGATTA CCCGGAAGGC TACGATGCCA GCCACGAGGA AGAATTCAGC GCCCGGGAGA TCTTCGTCAA GTACGTGCTG CGCAACAAGT TCCTGTGGTA CATCGCCATG GCCAACGTGT TCGTTTATCT GCTGCGCTAT GGCGTACTGG ACTGGGCACC GACCTATCTC AAGGAAGCCA AACACTTCAC GGTCGACAAG ACCTCCTGGG CTTACTTTCT GTACGAGTGG GCGGGCATTC CGGGCACGCT GCTGTGCGGC TGGATGTCGG ACAAGATCTT CAAGGGCAAT CGCGGCCTGA CCGGCATGGT GTTCATGTTT CTGGTGACCA TCGCCACGCT GGTGTACTGG CTGAACCCTG AAGGCAATCC GACCGTCGAC ATGATCGCGC TGGTGTCCAT CGGTTTCCTG ATCTACGGAC CGGTGATGCT GATCGGCCTG CAGGCGCTGG AACTGGCACC GAAGAAGGCA GCAGGCACGG CCGCCGGCTT TACCGGGCTG TTCGGCTATC TGGGCGGGTC GGTCGCGGCC AGCGCAGCGA TGGGCTACAC GGTTGACCAC TTCGGCTGGG ATGGCGGCTT CGTGCTGTTG ATCGGCGCGT GCATTCTGGC GATGGTGTTC CTTGCGCCGA CGCTGCGGCA CAAACAGGTC GCCAGCACAT CTCGCGACAC CAAAGGCTGA
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Protein sequence | MFGFFRPARH QAPLPEEKVD STYRRLRWQI FAGIFIGYAG YYLLRKNFSL AMPYLIDEGY TRGQLGVAMS AIAIAYGLSK FLMGIVSDRS NPRYFLPFGL LVSAGIMFIF GFAPWATSSV TIMFVLLFIN GWAQGMGWPP SGRTMVHWWS QKERGGVVSV WNVAHNVGGG LIGPLFLLGM GWTNDWHAAF YVPAAVALLV AVFAFATMRD TPQSVGLPPI EHYKNDYPEG YDASHEEEFS AREIFVKYVL RNKFLWYIAM ANVFVYLLRY GVLDWAPTYL KEAKHFTVDK TSWAYFLYEW AGIPGTLLCG WMSDKIFKGN RGLTGMVFMF LVTIATLVYW LNPEGNPTVD MIALVSIGFL IYGPVMLIGL QALELAPKKA AGTAAGFTGL FGYLGGSVAA SAAMGYTVDH FGWDGGFVLL IGACILAMVF LAPTLRHKQV ASTSRDTKG
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