Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0298 |
Symbol | |
ID | 3365774 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 317876 |
End bp | 318661 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637650641 |
Product | extracellular solute-binding protein |
Protein accession | YP_233409 |
Protein GI | 66043568 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAAGC GTTACAGCGC CCTGCTTACT GCATTGTTTG CCAGTCTGAT GCTGAGCCAG ACACCCGCCC ACGCCAACGG CCTGGACGAC GTTGTAGCGC GCGGCACCCT CAAGGTAGCC GTTCCGCAGG ACTTCCCGCC ATTCGGCTCG GTCGGCCCGG ACATGAAGCC GCGCGGCCTG GACATCGATA CTGCACAGCT GCTGGCTGAC AAGCTGAAGG TCAAGCTGGA GCTGACCCCG GTCAACAGCA CCAACCGCAT TCCGTTCCTG ACCACCGGCA AGGTCGACCT GGTGATCTCC AGCCTGGGCA AGAACCCGGA TCGCGAGAAA GTCATCGACT TCTCGCGCGC CTACGCACCT TTCTATCTGG CGGTATTCGG CCCACCTGAT TCGCCGGTCA AGGACATCGC TGACCTGAAA GGCAAGACTA TCAGCGTGAC CCGTGGCGCG ATCGAGGATA TCGAGCTGTC GAACGTTGCT CCCGAGGGCG CGACCATCAA GCGCTTTGAA GACAACAACT CGACCATCGC GGCCTATCTC GCTGGCCAGA CTGACCTGAT CGCCAGCGGC AACGTGGTGA TGGTCGCCAT CAGTGAGCGC AATCCCAAGC GCATTCCGGC GATGAAAGTG AAACTCAAGG ACTCGCCGGT GTACGTTGGC GTGAACAAAG GTCAGCCAGA ACTGCTGGGC AAGGTCAACG AGATTCTGAA CGCTGCCAAG GCTGACGGTA CGCTGGAAAA AGCGTCGCAG AAATGGCTGA AGGACCCGCT ACCCGCCGAT CTCTGA
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Protein sequence | MTKRYSALLT ALFASLMLSQ TPAHANGLDD VVARGTLKVA VPQDFPPFGS VGPDMKPRGL DIDTAQLLAD KLKVKLELTP VNSTNRIPFL TTGKVDLVIS SLGKNPDREK VIDFSRAYAP FYLAVFGPPD SPVKDIADLK GKTISVTRGA IEDIELSNVA PEGATIKRFE DNNSTIAAYL AGQTDLIASG NVVMVAISER NPKRIPAMKV KLKDSPVYVG VNKGQPELLG KVNEILNAAK ADGTLEKASQ KWLKDPLPAD L
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