| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_0290 |
|---|
| Symbol | |
|---|
| ID | 3365766 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 308664 |
|---|
| End bp | 309332 |
|---|
| Gene Length | 669 bp |
|---|
| Protein Length | 222 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637650633 |
|---|
| Product | isoprenoid biosynthesis protein with amidotransferase-like domain |
|---|
| Protein accession | YP_233401 |
|---|
| Protein GI | 66043560 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3155] Uncharacterized protein involved in an early stage of isoprenoid biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGAAAA AAGTGGCTGT AATCCTCTCC GGCTGTGGCG TCTACGACGG TGCCGAGATT
CACGAAAGCG TCCTCACCCT GCTGCGTCTG GATCAGCGCG GTGCGCAGGT TCAGTGCTTT
GCGCCCGACA TCAATCAGCA TCATGTGGTC AATCACCTGA CCGGTGAGGA AATGCCCGAG
TCGCGCAATG TGCTGGTCGA GTCTGCGCGC ATTGCACGCG GCGAAGTGAA GGACATCCGC
GAAGCAAATG CCGAGGACTT TGACGCCCTG ATCATCCCGG GCGGTTTTGG CTCGGCAAAG
AATCTTTCCG ACCTTGCCCT GCAAGGCCCG GCCTGCCAGG TCGAAGCCGG ACTGCTGGAG
CTGGCCGAGG CGTTTGCCGA AGCCGGCAAA CCGGTCGGGC TGATCTGCAT CACCCCGGCA
CTCGCGGCCA AGATCTATGG CCCCGGCGTT ACCTGCACCA TCGGCAACGA CCCTGAAACC
GCTGCGGCCA TCACCAAAAT GGGCGGCAGC CATGCGGAAT GCGCCGTCGA TGACATCGTC
GAGGACGAAG CCCGAAAACT GGTCAGCACA CCTGCCTACA TGGTCGCCAA GAGCATCAGC
GAGGCGGCCT CGGGCATCAA CAAGCTGGTT GACCGCGTGC TGGAACTGAC CCACGAGGGC
GATGCCTGA
|
|---|
| Protein sequence | MQKKVAVILS GCGVYDGAEI HESVLTLLRL DQRGAQVQCF APDINQHHVV NHLTGEEMPE
SRNVLVESAR IARGEVKDIR EANAEDFDAL IIPGGFGSAK NLSDLALQGP ACQVEAGLLE
LAEAFAEAGK PVGLICITPA LAAKIYGPGV TCTIGNDPET AAAITKMGGS HAECAVDDIV
EDEARKLVST PAYMVAKSIS EAASGINKLV DRVLELTHEG DA
|
|---|
| |