Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0273 |
Symbol | |
ID | 3365749 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 291899 |
End bp | 292735 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637650616 |
Product | integrase catalytic subunit |
Protein accession | YP_233384 |
Protein GI | 66043543 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACTGA GGCCTTTACA TCCTCTGGAC GGCCTGCTGA AGTTTGCCGG TCTGGCACGC AGCACTTTTT ACTATCAACA AAAGGTACTG CTGGTAGATG ACAAATACGC CGGGCTGAAA GACCTGATTC AGGCAACTTT CTACGAGCAC AAGGGCCGGT ATGGCTATCG TCGCATCACG GCAGCTTTGC GCAGGGCGGG CCATCTTGTG AACCACAAGA CGGTGCAGAA ACTAATGGGG CAGCTAGGCC TGAAGAGCCT GATACGCGTG AAGAAATACC GTTCCTACAA AGGCGAAACA GGCAAGGCCG CGCCTAACCT GCTAAAGCGT GATTTCAAAG CGCAATACCT TAACCAGAAA TGGGCCACCG ACGTGACCGA ATTCAAAGTA GGAGGCCAGA AACTTTATCT GTCGCCGATC ATGGATCTGT ACAGCGGCGA AATCATTTCC TATGCGATTG CCAGGCGCCC GCTGTACTCC ATGGTCGACG AAATGCTTGA AGGAGCATTT AAGCGGCTTG GACCGCATGA AAAGCCGATT TTGCATTCCG ACCAGGGCTG GCAATATCGG ATGCCTATTT ACCAGCGACT GCTCAATGAG AATTCGATCG CAGCCAGCAT GTCGCGCAAG GGTAACTGCT ACGACAACGC GGCTATTGAG AGCTTTTTTA GCACGCTGAA ATCCGAATTT TTCTACCTGA ACAAATTTAA CGATCTGGAT GAGCTTCAAG CGGGTATCGA AGAGTACATT GAGTATTACA ATCACTCACG CATAAAACTG AAGCTTAACG GCCTGAGTCC TGTGGAATAC AGAATGCAGG CCGCCAAGGC AGCGTAG
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Protein sequence | MELRPLHPLD GLLKFAGLAR STFYYQQKVL LVDDKYAGLK DLIQATFYEH KGRYGYRRIT AALRRAGHLV NHKTVQKLMG QLGLKSLIRV KKYRSYKGET GKAAPNLLKR DFKAQYLNQK WATDVTEFKV GGQKLYLSPI MDLYSGEIIS YAIARRPLYS MVDEMLEGAF KRLGPHEKPI LHSDQGWQYR MPIYQRLLNE NSIAASMSRK GNCYDNAAIE SFFSTLKSEF FYLNKFNDLD ELQAGIEEYI EYYNHSRIKL KLNGLSPVEY RMQAAKAA
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