Gene Psyr_0202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0202 
Symbol 
ID3365678 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp217547 
End bp218470 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content60% 
IMG OID637650545 
Productregulatory protein, LysR:LysR, substrate-binding 
Protein accessionYP_233313 
Protein GI66043472 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCTTA CAGAATTGCG CTACATCGTT ACGCTCGCCC AGGAGCAGCA CTTTGGCCAT 
GCAGCAGAAC GCTGCCATGT CAGCCAGCCA ACGCTGTCGG TGGGTGTCAA AAAACTCGAA
GACGAACTCG GTGTGCTCAT TTTCGAGCGC AGCAAAAGTG CTGTGCGCCT GACACCGGTC
GGTGAAGGCA TCGTTGCGCA GGCGCAGAAA GTGCTGGAGC AGGCCCAGGG TATCCGCGAG
CTGGCCCAGG CCGGCAAGAA CCAGCTGACC GCCCCGCTGA AAGTCGGCGC GATCTACACC
GTCGGTCCTT ACCTGTTTCC TCACCTGATC CCACAACTGC ACCGGGTCGC CCCGCAGATG
CCGTTGTACA TCGAAGAAAA CTTCACGCAT GTGCTGCGCG ACAAGCTGCG TAACGGTGAG
CTGGATGCCG TCATCATTGC CTTGCCGTTC AACGAAGCCG ACGTGCTGAC CCTGCCGCTT
TACGACGAAC CGTTCTCTGT GCTGATGCCG GCCGACCATC CCTGGACTCA GAAAGAGACC
ATCGATGCCT CGGCGCTCAA CGACAAGAGC CTGCTGTTGC TAGGCGAAGG TCACTGCTTC
CGTGATCAGG TCCTGGAAGC CTGCCCGACG CTGGGCAAAG GCAACGAAGG TGCCAAGCAC
ACGACAGTAG AATCCAGCTC GCTGGAAACC ATTCGGCACA TGGTCGCCTC CGGGCTGGGC
ATTTCGATCC TGCCGCTGTC GGCAGTCGAC AGCCACCATT ACGCACCCGG CGTGATCGAA
GTCCGCCCGC TGACGCCGCC CGTGCCTTTC CGCACGGTCG CCATCGCCTG GCGTGCAAGC
TTCCCGAGAC CCAAAGCCAT CGAAATCCTC GCTGACTCTG CACGTCTGTG CTCGGTGGCA
CGTCCGAAAA CAGTCGCTAG CTAG
 
Protein sequence
MTLTELRYIV TLAQEQHFGH AAERCHVSQP TLSVGVKKLE DELGVLIFER SKSAVRLTPV 
GEGIVAQAQK VLEQAQGIRE LAQAGKNQLT APLKVGAIYT VGPYLFPHLI PQLHRVAPQM
PLYIEENFTH VLRDKLRNGE LDAVIIALPF NEADVLTLPL YDEPFSVLMP ADHPWTQKET
IDASALNDKS LLLLGEGHCF RDQVLEACPT LGKGNEGAKH TTVESSSLET IRHMVASGLG
ISILPLSAVD SHHYAPGVIE VRPLTPPVPF RTVAIAWRAS FPRPKAIEIL ADSARLCSVA
RPKTVAS