Gene Psyr_0201 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0201 
Symbol 
ID3365677 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp215460 
End bp217535 
Gene Length2076 bp 
Protein Length691 aa 
Translation table11 
GC content64% 
IMG OID637650544 
ProductATP-dependent DNA helicase RecG 
Protein accessionYP_233312 
Protein GI66043471 
COG category[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG1200] RecG-like helicase 
TIGRFAM ID[TIGR00643] ATP-dependent DNA helicase RecG 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGC TTTCCAGGGT CTCGGTCACG GCGCTCAAGG GTGTCGGCGA AGCGATGGCA 
GAAAAGCTGG CCAAGGTCGG CCTGGAAACA CTGCAGGACG TGCTGTTCCA TCTGCCGCTG
CGTTATCAGG ATCGCACGCG CATCGTACCG ATCGGTGCGC TGCGTCCCGG TCAGGATGCC
GTTATCGAAG GCGTGGTCAG CGGTGCCGAT GTGGTGATGG GCAAGCGTCG CAGCCTGCTG
GTGCGGCTGG GCGACGGCAC CGGGGTCGTC AGCCTGCGCT TCTACCATTT CAGCAACGCC
CAGAAAGAAA GCATGAAGCG TGGCACGCAC CTGCGTTGCT TCGGCGAAGC GCGCCCGGGT
GCTTCCGGAC TGGAGATCTA TCACCCGGAA TATCGGGCGA TTACCGGTGA TGAGCCCGCG
CCCGTCGAAC AGACCCTCAC GCCGATCTAC CCGACGACCG AAGGCCTGAC CCAACAGCGT
CTGCGCCAGC TGTGCCAGCA AAGCCTGGCG ATGCTCGGCC CCAAAAGTCT GCCGGACTGG
CTGCCTGAAG AGCTGGCCCG CGATTATCAG CTGGCCCCGC TGGATGATGC GATCCGTTAC
CTGCATCACC CGCCGGCCGA TGCCGACGTG GAGGAGCTGG CCCTCGGGCA TCATTGGGCG
CAGCACCGAC TGGCTTTCGA AGAACTGCTG ACTCACCAGC TTTCCCAGCA ACGCCTGCGT
GAAAGCCTGC GGTCACAGCG CGCACCGGCA TTGCCCGTTG CGAAAAAACT GCCGAAACAG
TTTCTCGCCA ACCTCGGCTT TGCCCCCACC GGCGCGCAGC AGCGTGTCGG CAAGGAAGTC
GCCTATGACC TGAGTCAGCC TGAGCCGATG CTGCGGCTGA TTCAGGGCGA CGTAGGGTCG
GGCAAGACCG TGGTTGCTGC GCTGGCTGCA TTGCAGGCAC TGGAAGCGGG TTATCAAGTG
GCGCTGATGG CGCCCACCGA GATTCTCGCC GAGCAGCACT ACATCAACTT CCAGCGCTGG
CTTGAGCCCC TGGGCGTGGG TGTGGCATGG CTGGCGGGCA AGCTCAAAGG CAAGGCGCGC
GTCGCGTCTC TGGAGCAGAT CGCCGGCGGC ACACCCATGG TGGTCGGCAC CCATGCGCTG
TTTCAGGACG AAGTGCAGTT CAAGAACCTG GCACTGGTGA TCATCGACGA GCAGCACCGG
TTCGGCGTTC AGCAACGCCT GGCGCTGCGC AAAAAGGGCG TTGGCGGTCT GATGTGCCCG
CATCAGTTGA TCATGACCGC CACACCGATC CCGCGCACGC TGGCCATGAG TGCCTACGCC
GACCTGGACA CTTCGATCCT CGACGAACTG CCGCCGGGGC GGACGCCAGT CAATACCGTG
CTGGTTGCCG ACAGTCGCCG CCTGGAAGTC GTGGAGCGGG TGCGCGCCGC CTGCGCAGAA
GGGCGCCAGG CCTACTGGGT GTGCACGCTG ATCGAAGAAT CCGAAGAGCT GACCTGCAAG
GCCGCTGAAA CCACCTACGA AGAGTTGAGC AGCGCGTTGG GTGACGTGCG CGTCGGGCTG
ATTCACGGGC GCATGAAGCC TGCAGAAAAG GCCGCGATCA TGGCCGAGTT CAAGCAAGGT
GCGCTGCAAT TGTTGGTGGC AACGACGGTC ATCGAAGTCG GTGTCGACGT GCCGAACTCC
AGTCTGATGA TCATCGAGAA CCCCGAGCGC CTCGGCCTGG CGCAATTGCA CCAGTTGCGC
GGCCGCGTCG GGCGCGGCAG CGCGGTGAGT CATTGTGTGC TGCTCTACCA TCCGCCGCTT
TCACAGATCG GACGGCAGCG CCTGGGCATC ATGCGCGAAA CCAACGATGG TTTCGTCATC
GCCGAAAAAG ACCTTGAACT GCGTGGCCCC GGCGAAATGC TCGGCACCCG ACAAACGGGC
CTTCTGCAAT TCAAGGTCGC CGACCTGATG CGCGACGCAG ACCTGCTACC GGCCGTACGC
GACGCGGCTC AGGCCTTGTT GGAGCGCTGG CCGCAACACG TCAGCCCACT GCTCGACAGG
TGGCTGCGTC ATGGCCAGCA GTATGGCCAG GTGTGA
 
Protein sequence
MSELSRVSVT ALKGVGEAMA EKLAKVGLET LQDVLFHLPL RYQDRTRIVP IGALRPGQDA 
VIEGVVSGAD VVMGKRRSLL VRLGDGTGVV SLRFYHFSNA QKESMKRGTH LRCFGEARPG
ASGLEIYHPE YRAITGDEPA PVEQTLTPIY PTTEGLTQQR LRQLCQQSLA MLGPKSLPDW
LPEELARDYQ LAPLDDAIRY LHHPPADADV EELALGHHWA QHRLAFEELL THQLSQQRLR
ESLRSQRAPA LPVAKKLPKQ FLANLGFAPT GAQQRVGKEV AYDLSQPEPM LRLIQGDVGS
GKTVVAALAA LQALEAGYQV ALMAPTEILA EQHYINFQRW LEPLGVGVAW LAGKLKGKAR
VASLEQIAGG TPMVVGTHAL FQDEVQFKNL ALVIIDEQHR FGVQQRLALR KKGVGGLMCP
HQLIMTATPI PRTLAMSAYA DLDTSILDEL PPGRTPVNTV LVADSRRLEV VERVRAACAE
GRQAYWVCTL IEESEELTCK AAETTYEELS SALGDVRVGL IHGRMKPAEK AAIMAEFKQG
ALQLLVATTV IEVGVDVPNS SLMIIENPER LGLAQLHQLR GRVGRGSAVS HCVLLYHPPL
SQIGRQRLGI MRETNDGFVI AEKDLELRGP GEMLGTRQTG LLQFKVADLM RDADLLPAVR
DAAQALLERW PQHVSPLLDR WLRHGQQYGQ V