Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0157 |
Symbol | |
ID | 3365633 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 170483 |
End bp | 172120 |
Gene Length | 1638 bp |
Protein Length | 545 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637650500 |
Product | twin-arginine translocation pathway signal |
Protein accession | YP_233268 |
Protein GI | 66043427 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.695568 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGACA AAAAAAACGA CTCCACGTTG ATCACAGGTG AAGACAGCCT GCGGGTTTTC GAAGGACTCA ATCGCGGTCT GTCACGTCGC GATGCGCTAC GCATGCTGGG CGTTGCAGGT GTGGTCGCGG CCGGCTCCAC CAGCCTGTTC GGCGCGGCCG GTAAGGTGTT TGCCGATGAC GCGGATGCCC CTGTCAAAGG CAAGCCGGGC GGCCGTATCC GGGTCGCCGG CATGTCCAGT TCTACCGCCG ATACGCTGGA TCCGGCCAAG GGCGCGCTGT CTACCGATTA CGTGCGTCAC TTCATGTTCT ACAACGGCCT GACCCGTTTC GACAGCCATC TGGTGCCGCA CATGGAGCTG GCCGAGAAGA TCGAAAGCGA CAACGCCACG GTCTGGACCG TGACCCTGCG CCAGGGCGTA ACCTTCCACA ACGGCAAGGC GCTGACCGCT GGCGACGTGG TGTTCTCCCT GTCGCGCCAC AAGGACCCGG CCACCGGCTC GAAAGTCCTG CCATTGATGG CGCAGTTTTC CGAGATCAAA GCCACCGGCC CGCTGGAAGT GCAGATCACC CTCAGCTCGC CAAACGCCGA GCTGCCGTCG ATCCTCGCGG TTTCGCACCT GCTGATCGTG CCCGAAGGCA CCACCGATTT CAGCAAAGGC ATCGGTACCG GGCCGTTCAC CGTCAAGGAA TTCAACCCTG GCGTGCGCTC GGTCAGTGCG CGCAACCCCA ACTACTGGAA ACCGGGCCTG CCGTACCTGG ACGAAATCGA ATTCATCGCC ATCGCCGACG AACCCTCGCG GGTCAACGCG CTGCTCTCCG GCGACGTACA CATGATCAAC GAGGTCAACC CGCGCTCCAC CACGCGTATT GCCGCCAGCG CCAAACACCG CGTGGTCGAT GCACCGTCCG GCAACTACAC CGACCTGATC ATTCGTCAGG ACCAGATGCC CGGCAAGAGC CCGGAATTCA CCGAGGCCAT GAAGTACCTG CTGGACCGTG AACAGGTCAA ATCGGCGGTG TTCCGTGGCT ACGCCCGCGT CGGTAACGAC CATCCAATCT CGCCAGGCTC GCGCTACTTC AACGCGGACC TGCCACAGCG CGCCTACGAC CCGGAAAAAG CCAAATTCCT GCTCAAAAAA GCCGGCATGG AAAAGATCAC CATGGCCGTG GCGGCATCGC CTGCTGCCAC CGGCTCGGTG GACATCGCCG TGCTGCTGCA ACAGTCCGCC AAACAGGCCG GTCTGACCCT CAACGTCAAC CGTCTGCCAA GCGACGGCTA CTGGTCCAAC CACTGGATGA AGCACCCGCT GAGCTTCGGC AACATCAACC CGCGCCCGAA CGCCGACGTG ATCTTCTCGC AGTTCTTCCA GTCCACAGCG CCGTGGAATG AATCCGGCTG GAAAAACGAC CAGTTCGACC AACTGCTGTT GCTGGCCCGT GGCGAAACCG ACGATGCCAA GCGCGGCAAA ATGTATGGCG ACATGCAAGC TCTGGTCAGC CAGAACTGCG GCATCGGCAT CCCCGTGTTC ATCAGCAACA TCGACGGTGT GGACAAGCGT ATCCAGGGCT ATTCCAGCAA CCCGCTGGGC GGCTTCATGG GTTACATGTT CAGCGAGCAG GTGTGGCTGG ACGCGTAA
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Protein sequence | MTDKKNDSTL ITGEDSLRVF EGLNRGLSRR DALRMLGVAG VVAAGSTSLF GAAGKVFADD ADAPVKGKPG GRIRVAGMSS STADTLDPAK GALSTDYVRH FMFYNGLTRF DSHLVPHMEL AEKIESDNAT VWTVTLRQGV TFHNGKALTA GDVVFSLSRH KDPATGSKVL PLMAQFSEIK ATGPLEVQIT LSSPNAELPS ILAVSHLLIV PEGTTDFSKG IGTGPFTVKE FNPGVRSVSA RNPNYWKPGL PYLDEIEFIA IADEPSRVNA LLSGDVHMIN EVNPRSTTRI AASAKHRVVD APSGNYTDLI IRQDQMPGKS PEFTEAMKYL LDREQVKSAV FRGYARVGND HPISPGSRYF NADLPQRAYD PEKAKFLLKK AGMEKITMAV AASPAATGSV DIAVLLQQSA KQAGLTLNVN RLPSDGYWSN HWMKHPLSFG NINPRPNADV IFSQFFQSTA PWNESGWKND QFDQLLLLAR GETDDAKRGK MYGDMQALVS QNCGIGIPVF ISNIDGVDKR IQGYSSNPLG GFMGYMFSEQ VWLDA
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