Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0105 |
Symbol | |
ID | 3365581 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 116991 |
End bp | 117812 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637650449 |
Product | integrase catalytic subunit |
Protein accession | YP_233217 |
Protein GI | 66043376 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTGGGCG TCAGTGCGAC CGGCTTTCAT TGCCACCAAG CTCGCTGTGC AGTTAATTGC CCTCAACGAG GTTTAAGCGA CGCAGCATTG CTCGTCCACA TTCGCGCCGC TCATGCCCGC AGTCGTGGCA GCTACGGCTG GCCCAGGATC TGGCACGGTT TGCTGGCTGA CGGCGTTCGC GTCGGCAAAG AGCGTGTGCA AAAGCTGATG CAGCTTCATG GTATTTGCGG CAAGGGCAAA CGACGTTTCA AAGTGACCAC TGATAGCGCT CATGACTTAC CCATTTCGGA GAACCTGCTG GATCGCCAGT TCGCCGTGAT GGAGCCTGAC AGAGCTTGGG TGGGCGACAT CACCTACATC CCGACAGATG AGGGCTGGCT GTTTCTGGCG GTAGTGGTAG ACCTGTTCAG TCGCCAGATC GTGGGCTGGT CGATGGACGA GCGCATGAAA AGCAGCCTGG TGATTGATGC GTTGCGCATG GCCTGGTTCA AGCGTCATCC ACATAAGGCC TCCGGACTGC TGTTTCATAG TGATCGCGGG AGCCAGTACG CCAGCTTTGA TTTTCGTCAT GTCCTTCAGG GCTACGGGAT TGTCAGCTCG ATGAGTCGAC GGGGCAATTG CTGGGATAAC GCGTGCAGCG AGACCGTGTT CGGCTCGTTG AAGGTGGAAC GTCTGCATGG CTTGAAATTC AAAACCCGAC GCGCTGCCAA GGACGAGGTC ATTAACTGGC TGCTGTGGTA CAACCAGGAG CGCCTGCACT CGACGCTTCA TTACGTAAGT CCGATGCAAT ACGAGCAGAA CTGGCAAAGG CAACAACCTT AG
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Protein sequence | MLGVSATGFH CHQARCAVNC PQRGLSDAAL LVHIRAAHAR SRGSYGWPRI WHGLLADGVR VGKERVQKLM QLHGICGKGK RRFKVTTDSA HDLPISENLL DRQFAVMEPD RAWVGDITYI PTDEGWLFLA VVVDLFSRQI VGWSMDERMK SSLVIDALRM AWFKRHPHKA SGLLFHSDRG SQYASFDFRH VLQGYGIVSS MSRRGNCWDN ACSETVFGSL KVERLHGLKF KTRRAAKDEV INWLLWYNQE RLHSTLHYVS PMQYEQNWQR QQP
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