Gene Psyr_0084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0084 
Symbol 
ID3365559 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp90266 
End bp91276 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content59% 
IMG OID637650427 
Productextracellular solute-binding protein 
Protein accessionYP_233196 
Protein GI66043355 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1613] ABC-type sulfate transport system, periplasmic component 
TIGRFAM ID[TIGR00971] sulfate/thiosulfate-binding protein 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCATTC GCCGTTTTGC GCTGGCGGCT CTCGCCAGTG CTGTTTTCGC AGGTTCGGCT 
GTCGCCAAGG ATTACGAACT GCTCAACGTG TCCTACGATC CGACCCGCGA GCTGTATCAG
GACTACAACG CAGAATTCGT CAATTTCTGG AAAAAATCCC ACCCGGACGA CAAGGTCGAG
ATCAAGCAAT CTCACGGCGG CTCGGGCAAG CAGGCGCGTG GCGTGATCGA CGGCCTGCGT
GCCGACGTGG TGACCCTGGC ACTGGCCGGT GACATCGACG AAATCGCCAG GCTCGGCAAG
ACCCTGCCGG AAAACTGGCA GACCCGCCTG CCGGACGCGA GCACACCGTA CACCTCGACC
ATCGTGTTTC TGGTGCGCAA GGGCAACCCG AAAGGCATCA AGGACTGGGG CGACCTGACC
AAGGAAGGCG TCTCGGTGAT CACCCCCAAC CCGAAAACCT CGGGCGGTGC GCGCTGGAAC
TTCCTGGCCG CCTGGGCCTA CGGCCTGAAG GCGGGCGGCG GTGACGAAGC CAAGGCCAAG
GAATACGTAC AGACGCTGTT CAAGCACGTG CCGATCCTGG ACACCGGCGC GCGCGGTTCG
ACCATCACCT TTGTCAACAA CGGTCAGGGT GACGTGCTGC TGGCGTGGGA AAACGAAGCG
TTTCTGGCGT TGAAAGAAGA CGGCGGCAAG GACAAGTTCG ACATCGTCGT ACCGTCGCTG
TCGATCCTTG CCGAACCTCC GGTCGCCGTG GTCGACAAGA ACGCCGAGCG GAAAGGCAAC
AGCGAAATCG CGACTGAATA CCTCAAGCAC CTGTACAGCA AGGAAGGTCA GGAAATCGCC
GCGAAAAACT TCTATCGTCC ACGTGATGCC GAAGTGGCCG CCAAGTACGA GAAGCAATTC
CCGAAACTCG ATCTGGTGAC TATCGACAAA GACTTTGGTG GCTGGAAAAC TGCGCAGCCG
AAGTTTTTCA ATGACGGCGG CGTGTTCGAT CAGATTTATC AGGCGCAATA A
 
Protein sequence
MSIRRFALAA LASAVFAGSA VAKDYELLNV SYDPTRELYQ DYNAEFVNFW KKSHPDDKVE 
IKQSHGGSGK QARGVIDGLR ADVVTLALAG DIDEIARLGK TLPENWQTRL PDASTPYTST
IVFLVRKGNP KGIKDWGDLT KEGVSVITPN PKTSGGARWN FLAAWAYGLK AGGGDEAKAK
EYVQTLFKHV PILDTGARGS TITFVNNGQG DVLLAWENEA FLALKEDGGK DKFDIVVPSL
SILAEPPVAV VDKNAERKGN SEIATEYLKH LYSKEGQEIA AKNFYRPRDA EVAAKYEKQF
PKLDLVTIDK DFGGWKTAQP KFFNDGGVFD QIYQAQ