Gene Psyr_0080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0080 
Symbol 
ID3365555 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp86468 
End bp87280 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content66% 
IMG OID637650423 
Producthypothetical protein 
Protein accessionYP_233192 
Protein GI66043351 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGAGC ATCAGTTGCT GGGCGTTGGC CTGGGGACCG TCATCGGCAT GGTACTGGCG 
CTGACCGGCG CGGGCGGCGG CATCCTCGCC GTGCCGCTGC TGGTCTTCGG TCTCGGTCTG
TCGATTGTCG AAGCGGCGCC TGTCGGTCTG TTGGCCGTAG GGCTGGCGGC GGGGATCGGT
GCGGTACTGG GGCTGCGTCA GGGCATCGTC CGCTACCGCG CGGCCGGGTA CATCGCGTCC
ATCGGTGTAC TGATGGCGCC TCTGGGCCTG TGGCTCGCTC ATCGACTGCC CAATACGCCG
CTGGCACTGG TCTTTTCCGC CGTGCTGCTG TACGCCTGTG GACGTATGTT CATCAGGGCC
AGCCGCGAAT TGCGCCACGA AAAGCCGGCG CCGCGTGCGG AAATACTGCC CTGCGTGCTC
AACCCGCTGC AGGGCCGCCT GCGCTGGACC ATGCCCTGCC TGCGCGCACT AACGCTGACC
GGCGTGGGCT CCGGGTTGCT GTCCGGGTTG TTGGGAGTGG GCGGCGGGTT CGTGATCATT
CCGGCGCTGA CCCGCTACAG CGATCTGGAC ATGAAAAGTG TCGTGGCGAC GTCACTGGCG
GTGATCGCCC TGGTCTCGAT GGGCAGCGTC ATTACCGCCT CATTGAGTGG TGTTATGCAT
TGGGCAGTTG GCGCGCCGTT CGCGCTGGGT GCAGTCATCG GCCTGATTAT CGGCAGACAA
GTCGCCCGCT ACCTCGCCGG CCCACGCCTG CAACAACTGT TCGCCGTATG CGGCATCGTC
GCGGCGTTCA TGCTGGCGTT GTCCGTGCGA TAA
 
Protein sequence
MDEHQLLGVG LGTVIGMVLA LTGAGGGILA VPLLVFGLGL SIVEAAPVGL LAVGLAAGIG 
AVLGLRQGIV RYRAAGYIAS IGVLMAPLGL WLAHRLPNTP LALVFSAVLL YACGRMFIRA
SRELRHEKPA PRAEILPCVL NPLQGRLRWT MPCLRALTLT GVGSGLLSGL LGVGGGFVII
PALTRYSDLD MKSVVATSLA VIALVSMGSV ITASLSGVMH WAVGAPFALG AVIGLIIGRQ
VARYLAGPRL QQLFAVCGIV AAFMLALSVR