Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0079 |
Symbol | |
ID | 3365554 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 85222 |
End bp | 86475 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637650422 |
Product | hypothetical protein |
Protein accession | YP_233191 |
Protein GI | 66043350 |
COG category | [R] General function prediction only |
COG ID | [COG0446] Uncharacterized NAD(FAD)-dependent dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGCTT CGACAACAAC CTGTCAGATC CTGATCGTCG GTGCCGGTGC TGCCGGTATC GCCACTGCCG CAAGCCTGCT CGCCCGCGAC GCCACCCTGC AGATCACCCT GGTCGACCCC GCCGATACCC ATTATTACCA GCCCGGCTGG ACCATGGTCG GTGCGGGGAT CTTCACGCCG CAGTCGACGG CGCGCAGCAT GGCCTCGCTG ATTCCCGAAG GCGTGCAGTG GATCAAGGCT GCGGTGGCGA CGTTCGAGCC GCAGCACAAC ACGCTGACGC TGGCTGACGG CCGCGTGCTC GGCTATCAGC AACTGGTGGT CTGCCCCGGC CTGAAGCTGG ACTGGTCGGC TATCGACGGG CTGGTCGACA CGCTCGGGGC CAATGGCGTG ACCTCCAACT ATCGCTATGA CCTGGCGCCC TACACCTGGA AGCTGGTGCA GAACCTGCAA CAGGGGCGCG CGCTGTTTAC CCAGCCGCCC ATGCCGATCA AGTGCGCCGG TGCGCCGCAG AAGGCCATGT ACCTGTCCTG CGATCACTGG TTGAAAAGCG GCCGTCTCGC GCAGATCAAT ACGCAGTTCT ACAACGCCGG TGGCGTGCTG TTCGGTGTCG CCGACTATGT GCCGGCGCTG ATGAAGTACG TCGAGCGCTA CGCCATCGAC CTCAAGTTCA GCCATCGGCT GGTCGCCGTC GACGGGCCTG GCAAACGCGC GACCTTCATC CGCACGCAAG CCGATGGCAG CAGCGAGACC GTCGAGCAAA GCTTCGAAAT GTTGCACGTA GTGCCGCCGC AGATTGCCCC TGACTTCATC CGCAGCAGCC CGCTGGCCGA TGCTGCGGGC TGGGTGGACG TCGACCCCGC CACGCTGAAG CACCGGCAGT TCGCCAATGT GCATGGCCTG GGCGATGCCA CCAATACCAG CAACGCCAAG ACCGCCGCAG CGGCACGCAA GCAGGCGCCG GTGGTGGCCA ACAACGTATT GGTCGCGCTG GGTCGTCGGA GTGAGTCCGC GGTGTATGAC GGTTACGGCT CGTGCCCGCT GACGGTCGAG AAAGGCCGCA TCGTGCTGGC CGAATTCACC TATGGCGGCA AGGTCGCGCC GAGCTTTCCG CGCTGGCTGC TGGACGGTCG CCAGCCAACC CGACTGGCCT GGTGGCTGAA AGCGCGAGTG CTGCCCGCGC TGTACTGGCA TGGCATGCTC AAAGGCCGTG AGTGGCTGGC CAAACCGCAA AAGGCTGACA CCCGGCATGG ATGA
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Protein sequence | MNASTTTCQI LIVGAGAAGI ATAASLLARD ATLQITLVDP ADTHYYQPGW TMVGAGIFTP QSTARSMASL IPEGVQWIKA AVATFEPQHN TLTLADGRVL GYQQLVVCPG LKLDWSAIDG LVDTLGANGV TSNYRYDLAP YTWKLVQNLQ QGRALFTQPP MPIKCAGAPQ KAMYLSCDHW LKSGRLAQIN TQFYNAGGVL FGVADYVPAL MKYVERYAID LKFSHRLVAV DGPGKRATFI RTQADGSSET VEQSFEMLHV VPPQIAPDFI RSSPLADAAG WVDVDPATLK HRQFANVHGL GDATNTSNAK TAAAARKQAP VVANNVLVAL GRRSESAVYD GYGSCPLTVE KGRIVLAEFT YGGKVAPSFP RWLLDGRQPT RLAWWLKARV LPALYWHGML KGREWLAKPQ KADTRHG
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